Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01525 ATGGGAATTAGCCGCTTCGTGCCGACTAACAGTAGAGATGGATACCATAAAGGGGATGCGAGATGTGATCCAGGTAACCAAACAGATGACTCCGCTGAATTTGATGTAATGAATGAGGATTCAGATGAAGAAGCATCTGGTTACGGAGATGTATTGGGGCTGACGGCAGAGGATATTAACCGGATGGTGTTTCGAACTGAGCAACGAGCCTATGAATTTTACCTGCGATTAGGAAAATGCCATGGGTTTGGTGTCCGGAAAGGGGATTATTGCAAGGATGAAAATGGAAATTTGATCCGTAGAAGATTCTTCTGCAACCGGGCCAGGTTGAGAGATGAGAAGCACTATGCAAGATTTGATAGGAAGAGAATGCATAAACCAGAAACCCGCACAAATTGTGAGGCAAAGTTATCAATATATTTGGATCGAGGTACTAGTAATTGGAAGGTTAGGAAGGTGATCCTTGACCACAACCATGACCTGACCCCGATAGGTATGGTTCACTTGATGCCTCAGTTTCGTGGATTGTCAGATGATGCGAAGGTACACATGGAAAGCATGCATAGCTATGGACTTCCTACCTCGAAGATAGTCGGATACATGTCTGGAATTGCAGGAGGTTACTCGCTGCTGGGGTTTACAAAGAAGGATGCGTATAACCACTTAGATAAAAAGAAGCGGGGGAACATCGCCGATGGTGACACGAACGCCACTGTCGTGTATCTACAAGGAAAAGCAGCTGCAGATCCAATGTCGACGGCGaggatgccgtcagtggtcgtcacagatggagatgatgcaattattgcagcggtccgaaaggtcttcccagatacaacgcaccgcctttgtgcatggcatcttcagaagaacgTCACATCAAACGGGAATGAGCATATGTTTAGAGATTTATTTTCCAAATGGCTGTATTCCGACATGGGCATTGAGGAATTTGAGAATGAGTGGGCCACTGCTACAGAGGAGTTCCGTTTCAACGAAAAGTGTTGGGCCCTACAGATGTACAAGAAAAAACACATGTGGGTCAGTGCATATCTGAGGGGAAAGTTTTGTGCTGGATATCGAACGACATCGAGGTGCGAGGGATTAAACTCTCATGTCAAGAAGTTCCTGACTTCCAGGCACACAATTTTGGAGCTTGTGCATAATTTGGAGGTGCTTGTACGTGAGTACCGAAATAATGAGATGGTGGCACAATTTAACTCCGTGAATAGCATCCCTGTGATGACAACATGTCTTGATCCAATTGAGAAGGGGGCTGCTAGGATGTACACACGAGCAATTTTCTCTCTGGTGAAAAAGGAGATTGATGCTGTCAGAGTGGTGAATTATGTAGCGAAGAGGAGAATTTCAACCACAATAGTATACACGACCGAAGAATATGGTAATCCGAGTCGCACTTTCATCACTCAGTTTGATAGGAACATGGGAAAATTTCTCTGTCACTGCAGATTTTGGGAACGAGAAGGCTTCCCGTGCCGACACATGTTCTTTGTCATGAAGTACGAGCATGTTCAAGAAATACCGCATCGTTTAGTTCTTACACGGTGGTGGAAAGACGCGAAATCTATCGATGCATATGTAGAGCGAGGTGAAGCAGACGATGAGAGGGGATTCTTAATGCGGCATGGCGCTCTTCACGAGGCATCCCAGTGGCTGTTGTCTCTTAGCGCTAGGAATCAAGTGGTGTACACAGAGGCCGTAAAGGGAATTCGGGCCTTGTGTACACGTCTGGTTGAAGCATTCAGTAGAAATGATGCGACGGGACAACACAGGAAAGAAGGGAGGAAGTGTACAATTTGCAAGAGACCTGGACACACAAAGAGGAGGTGCACGGGTAACACGAGACAGACAGGGACAGAGCGGGTAGAGTCTGACGATGGTTCAAGCGATGATGTACTCCATACTCAGAAATCTTCATCCAGTGCAAACGAAGATAAGAAGCATGATGCCTGCTTGAATGAAAGCATGGACGATCCGGAGACGATGAAAAGGCCCCTGTCAACGGCTGAGCTGGGTGATGGAATGTATCACCCAGTTGGTCTTGGCGAAGACGTGATAGGAACGGCACAAAGTGGGAATATAAGGTCGGAACATCTACTGGACTCTGCCGACTTCACTAGGGAGCACGGGAATTCGCATGACGTTCCTTGTAGCAACTTGCTCAACAATGGGGTTAGATAA 2202 0.4401 MGISRFVPTNSRDGYHKGDARCDPGNQTDDSAEFDVMNEDSDEEASGYGDVLGLTAEDINRMVFRTEQRAYEFYLRLGKCHGFGVRKGDYCKDENGNLIRRRFFCNRARLRDEKHYARFDRKRMHKPETRTNCEAKLSIYLDRGTSNWKVRKVILDHNHDLTPIGMVHLMPQFRGLSDDAKVHMESMHSYGLPTSKIVGYMSGIAGGYSLLGFTKKDAYNHLDKKKRGNIADGDTNATVVYLQGKAAADPMSTARMPSVVVTDGDDAIIAAVRKVFPDTTHRLCAWHLQKNVTSNGNEHMFRDLFSKWLYSDMGIEEFENEWATATEEFRFNEKCWALQMYKKKHMWVSAYLRGKFCAGYRTTSRCEGLNSHVKKFLTSRHTILELVHNLEVLVREYRNNEMVAQFNSVNSIPVMTTCLDPIEKGAARMYTRAIFSLVKKEIDAVRVVNYVAKRRISTTIVYTTEEYGNPSRTFITQFDRNMGKFLCHCRFWEREGFPCRHMFFVMKYEHVQEIPHRLVLTRWWKDAKSIDAYVERGEADDERGFLMRHGALHEASQWLLSLSARNQVVYTEAVKGIRALCTRLVEAFSRNDATGQHRKEGRKCTICKRPGHTKRRCTGNTRQTGTERVESDDGSSDDVLHTQKSSSSANEDKKHDACLNESMDDPETMKRPLSTAELGDGMYHPVGLGEDVIGTAQSGNIRSEHLLDSADFTREHGNSHDVPCSNLLNNGVR 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01525 733 ProSiteProfiles Zinc finger SWIM-type profile. 474 510 IPR007527 GO:0008270
Adu05g01525 733 MobiDBLite consensus disorder prediction 12 28 - -
Adu05g01525 733 Pfam MULE transposase domain 245 291 IPR018289 -
Adu05g01525 733 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 250 IPR031052 GO:0006355
Adu05g01525 733 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 255 572 IPR031052 GO:0006355
Adu05g01525 733 MobiDBLite consensus disorder prediction 609 682 - -
Adu05g01525 733 MobiDBLite consensus disorder prediction 714 733 - -
Adu05g01525 733 PANTHER OS02G0262500 PROTEIN 255 572 - -
Adu05g01525 733 PANTHER OS02G0262500 PROTEIN 58 250 - -
Adu05g01525 733 MobiDBLite consensus disorder prediction 719 733 - -
Adu05g01525 733 Pfam FAR1 DNA-binding domain 72 162 IPR004330 -
Adu05g01525 733 MobiDBLite consensus disorder prediction 1 29 - -
Adu05g01525 733 MobiDBLite consensus disorder prediction 647 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01525 Adu-Chr5 25980131 25983450 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01525 FAR1 1.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01525 - - adu:107468207 1269.99