Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01512 ATGGCGAGGGATTCAGTAGGACGGCAGTGCAGCAACGGTGACAAGCTCGGCGGAAGGCTCTACGGCGGAATGAAGGTGACCAGATTTGAGCTTCACTGCGGAGAAGAAGAAGTGACTTTCGTTCTCTCTTTTCTGCTAGGGTTGGGGGCCAAAGGAGGACATGACTTTAACCAACAAGAAGAGCTAGTAAGTAACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACTGAGGGAGCATTTTCTTCTGAATCTAATCAGTCAGAAGATATTCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGGAAATTGGAAAATACCACTTTTATACTTTGCAGCTTTCATTTGATTTTTTTATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGTCTGCCTACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATTAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGACAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTAAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAGAGAATTTAATGCTGATTATGAATCTACACATGGGGTGCCCGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGATAATACCGATGATTGCATAAAGTACACTGTGTGTAAGCATGGGAGGCCCGATTTTATGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGCGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGACATCTGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAAGCGGAGTAGGCTTAGGACAACCATCTAGGAAGAAGCGGCAATGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCCTGGCAAAAGGACATTGACAACAATGTTATTGAAGATGAAGCTAATTGTTCGGATGATGGCGACGCATATCCAGAACTGACGGCTGAGTTAGATAGTGATAATTAG 1536 0.4141 MARDSVGRQCSNGDKLGGRLYGGMKVTRFELHCGEEEVTFVLSFLLGLGAKGGHDFNQQEELVSNQDMMDEQNEFEQDFRDEFTEGAFSSESNQSEDILEAAYAVDSVQDITTLKFSENFAEEIGKYHFYTLQLSFDFFMKYSKSKGFSARKSKTFKNSTGEIYKQKFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLSAYRKMSEADIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSREFNADYESTHGVPVMQTCIELLERYAAELYTHEIFLFFRPFLSRAGSMRVLNIDNTDDCIKYTVCKHGRPDFMWTVDFRQEEMIFMRTCLRMESFGIPCEHIVKVLVDRDICVAKSSNPYVHQSGVGLGQPSRKKRQCCSVCQMEGHKKTTCPWQKDIDNNVIEDEANCSDDGDAYPELTAELDSDN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01512 511 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 318 IPR031052 GO:0006355
Adu05g01512 511 ProSiteProfiles Zinc finger SWIM-type profile. 396 434 IPR007527 GO:0008270
Adu05g01512 511 Pfam FAR1 DNA-binding domain 137 227 IPR004330 -
Adu05g01512 511 PANTHER OS03G0181600 PROTEIN 128 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01512 Adu-Chr5 25600731 25606044 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01512 FAR1 7.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01512 - - adu:107457868 511.916