Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01503 ATGGCTTTGAGGGCGGCTGCGGTTGCGGCGCAGCCTTCGTCGCGCACGGTGGAACCCAAATCCTCCCTCTTCGTTTCCGGGCTTAACAAACGGACGACATCTGAACGCCTACTCCAAGAATTTTCTAAGTTTGGCAAAGTTGTTCGCACTAGGGTGATGATCGATAGAGAAGGTTGTTCTAAAGGGTATGGTTTTGTACAATATGCCACTATAGAAGAGGCTGCAAAGGGCATCGAAAGCATGAATGGAAAGTTTTTGGATGGTTGGATTATATTTGTAGAGTATGCCAAATCTATCCCAGAACCTACACAGCAATCTCACCGGTATCTCCGGCAGTAG 339 0.4779 MALRAAAVAAQPSSRTVEPKSSLFVSGLNKRTTSERLLQEFSKFGKVVRTRVMIDREGCSKGYGFVQYATIEEAAKGIESMNGKFLDGWIIFVEYAKSIPEPTQQSHRYLRQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01503 112 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 98 IPR000504 GO:0003723
Adu05g01503 112 SUPERFAMILY RNA-binding domain, RBD 10 109 IPR035979 GO:0003676
Adu05g01503 112 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 11 107 - -
Adu05g01503 112 SMART rrm1_1 22 94 IPR000504 GO:0003723
Adu05g01503 112 CDD RRM_SF 23 94 - -
Adu05g01503 112 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 88 IPR000504 GO:0003723
Adu05g01503 112 Gene3D - 4 108 IPR012677 -
Adu05g01503 112 PANTHER TRANSFORMER-2-RELATED 11 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01503 Adu-Chr5 25378451 25380489 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01503 21 97 Eukaryotic Initiation Factors Gene Family AT4G34110 38.961 2.60e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01503 - - adu:107488830 222.246