Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01499 ATGTATAGGCTTCACTCTCAAATCCACCAGAGCAATGGTGCTCCTATTCTTTCTCCATATTCTCCTTCTTCTTCTTCTTTTTCTTCTTATAGTTCTTCTAATTCAGCTTCTTCATCCTCAGATTCTTCATCTGGGAATAGTAGAATAAGCCCTGCAATTATTTTCATCATAGTAATTTTATCTGTTGTGTTCTTCATCTTGGGCACCCTCCACCTGCTTGTTAGATTTCTCATGAGACAAAGATCTTCTTCTTCCTCATCAATTTCTCAATCCAATAGGTATCCTGAAATGTCTGAATCTGATGCATACCAGAGACAGTTGCAGCAACTATTCCACCTCCATGACTCAGGTTTAGATCAGGCTTTCATTGATGCACTCCCTGTGTTTCTCTACAAGGAGATAATTGGCTTGAAGGAGCCATTTGATTGTGCTGTTTGCCTTTGTGAGTTCTTGGAACAAGACAAGTTGAGGTTGCTGCCAAATTGCAACCATGCTTTTCACATTGACTGCATTGATACTTGGTTGCTTTCAAATTCAACTTGTCCCCTTTGTAGAGGGACACTTTATGCACCAGGGTTTTCATTTGAGACCCCAGTTTTTGACTTTGAAGGTCCATGTTATGAGGACGAAGATGGTGTTTCAGTTTCAGGATTTGGTGTCAGTGGTGCTGGTTCTTCTAACAAGCCTGCTGAGAATCACATAAGGAATGGGAAGAGGGTTTTTTCTGTGAGGCTTGGAAAATTCAGAAGCTCAAATAATAATGGAGTAGATGGTGTTGAAAAATGTGAAGGAGAGAGTAGTAATAGTAGTATTAGTTTTAGTAATAGTCATGGTAATTTGGATGCAAGGAGATGCTACTCAATGGGGTCTTACCAATATGTTGTTGCTGATTCTGATTTGAGGGTGGCTTTTGTGTCCAAGCATCAGTGGCAGTATGAGACAATTGATTAA 951 0.3985 MYRLHSQIHQSNGAPILSPYSPSSSSFSSYSSSNSASSSSDSSSGNSRISPAIIFIIVILSVVFFILGTLHLLVRFLMRQRSSSSSSISQSNRYPEMSESDAYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIIGLKEPFDCAVCLCEFLEQDKLRLLPNCNHAFHIDCIDTWLLSNSTCPLCRGTLYAPGFSFETPVFDFEGPCYEDEDGVSVSGFGVSGAGSSNKPAENHIRNGKRVFSVRLGKFRSSNNNGVDGVEKCEGESSNSSISFSNSHGNLDARRCYSMGSYQYVVADSDLRVAFVSKHQWQYETID 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01499 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 102 190 IPR013083 -
Adu05g01499 316 SUPERFAMILY RING/U-box 122 191 - -
Adu05g01499 316 CDD RING-H2_PA-TM-RING 142 185 - -
Adu05g01499 316 SMART ring_2 143 184 IPR001841 -
Adu05g01499 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 305 - -
Adu05g01499 316 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 305 - -
Adu05g01499 316 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Adu05g01499 316 Pfam Ring finger domain 142 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01499 Adu-Chr5 25198661 25199611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01499 38 307 C3H Transcription Factor Family AT2G18650 43.345 5.04e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01499 - - gmx:100805154 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01499 05 25198661 25199611 Adu03g03783 03 126532623 126533918 PCT