Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01474 ATGAACAAACAACTCAATTTCCGCTGGCTCTTTATCCTAATCCTCTTCTTATCAACATCACCATTTCTTCTCAGTGTTTCCTCCGACGCGAACGGCGGAGGCGGCGCCACCAACCCATTCACCCCGAAGGCCTCTCTGCTTCGCTATTGGGACAAGGAGATCCGCAACAACGTCCCGAAGCCAAACTTCCTCCTCTCAAAGGCGTCCCCGTTAACCGCCGTAGACGCAGCCGCATTCTCAAAACTCGCCGGCTCCGGAGGCGGAATCGCACTCTCCACGCGCCTCCCGGAGTTCTGTGCCGCCGCGAACCTCCTCTGCTTCCCGGACCTTGGAGCCTCGCTGGAGAAGCACGACAAGGACGCCAACTTCGCCGGCTACGGAGACAAGAACTTCACCAACTACGGAACGAGTCGACCCGGTGGTTCCGACGCGTTCAAGAAGTACTCCGACGACGCCAACATCCCCGTCAACGACTTCCGCCGCTACGGCCGCGACTCTGCCGGCCATTCCGAGAGTTTCAGCAGCTACGCCACCGACGGCAATGTTGTCGACCAATCCTTCCACACCTACGGCTCCAGCGCCGCAGGAGGAGGCGGCGATTTCCGCGGCTATGCCTCCGGTGTCAACGTCCCTAACCTGGGGTTCACATCCTACTCTGATCACGCCACCGGAAGAACCCAATCCTTCAATTCATACTCAGAAAACGGCAATGCTGGACAACAATCCTTCACCTCTTATGGCAAAAACGGGAACAAACCCGAGAACACGTTCACAGGGTACGGAACTGAGTCCAACGTTGTCGGGTCCGGGTTCTCTAACTATGCTGAAACCGCCAACGCCGGCAACGACACGTTCAAAGGGTACGGCGTGAATATGAACAACCCAACCAACACTTTCTCAAACTACGCCAGCGGCGGAAACGGCGCCGTGGAGAGCTTCACCACCTACAGAGAGCAATCCAATGTGGGTGCAGATTCTTTCACCTCTTACGCCAAAGGCACCAACGCCGCCAAAGTGGAGTTCAGCAACTACGGAAAATCGTTCAACGAAGGAACTGACACGTTCTCAGGCTACGGAAAAGGTTCCACCGGAAAAACCGAGGTTGGGTTCACTGGCTATGGAGTCAACAACACCTTCAAGGATTACACAAAAGACGGAATGTCATTCGCGAGGTACACAAATGTGAGTTCTGGTTCTGGTTTGGGTTCTTCTCTAGTGAAAACGAAGGATTCTGGTATCAGTGGCAGTTTGGTAAATAAGTGGGTAGAACCGGGCAAATTCTTCAGAGAGAAGATGATAAAAGAAGGTACCGTGATGCCCATCCCTGACATTAGGGATAAAATGCCTAAAAGGTCGTTTTTGCCCCGGACCATATTGTCGAAACTACCCTTCTCTACTTCTAAGATCCCTGAACTGAAGCAGATTTTCAAAGCCTCAGACAACGGTTCCATGGAGAAGATGATGAGAGAGTCATTGCAAGAGTGCGAGAGGGTCCCATCGCCCGGGGAAACGAAACGGTGCGTTGGATCGATGGAGGACATGATCGACTTTGCAACTTCGGTTTTGGGTCGGAACGTTGCGGTTCGGTCAACCCTGAACGTAAACGGGTCGAAGAAGAATGTGTTGGTGGGTAAGGTTATTGGGATCAATGGTGGAAGGGTCACGCAGTCTGTGTCGTGTCATCAAAGTTTGTTTCCTTATTTGTTGTATTATTGTCATTCGGTTCCGAAGGTCCGGGTTTACGAAGCGGATCTACTTGACCCGAAAAGTAAGGATAAGGTTAACCACGGTGTTGCTATTTGTCACTTGGATACCTCGGCTTGGAGCCCCACTCATGGTGCATTCCTTTCTCTTGGGTCGGGTCCGGGTCGGATTGAAGTTTGTCATTGGATCTTTGAGAATGACATGACTTGGACCATTGCTGATTGA 1929 0.5231 MNKQLNFRWLFILILFLSTSPFLLSVSSDANGGGGATNPFTPKASLLRYWDKEIRNNVPKPNFLLSKASPLTAVDAAAFSKLAGSGGGIALSTRLPEFCAAANLLCFPDLGASLEKHDKDANFAGYGDKNFTNYGTSRPGGSDAFKKYSDDANIPVNDFRRYGRDSAGHSESFSSYATDGNVVDQSFHTYGSSAAGGGGDFRGYASGVNVPNLGFTSYSDHATGRTQSFNSYSENGNAGQQSFTSYGKNGNKPENTFTGYGTESNVVGSGFSNYAETANAGNDTFKGYGVNMNNPTNTFSNYASGGNGAVESFTTYREQSNVGADSFTSYAKGTNAAKVEFSNYGKSFNEGTDTFSGYGKGSTGKTEVGFTGYGVNNTFKDYTKDGMSFARYTNVSSGSGLGSSLVKTKDSGISGSLVNKWVEPGKFFREKMIKEGTVMPIPDIRDKMPKRSFLPRTILSKLPFSTSKIPELKQIFKASDNGSMEKMMRESLQECERVPSPGETKRCVGSMEDMIDFATSVLGRNVAVRSTLNVNGSKKNVLVGKVIGINGGRVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKSKDKVNHGVAICHLDTSAWSPTHGAFLSLGSGPGRIEVCHWIFENDMTWTIAD 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01474 642 MobiDBLite consensus disorder prediction 226 260 - -
Adu05g01474 642 ProSiteProfiles BURP domain profile. 427 641 IPR004873 -
Adu05g01474 642 SMART BURP_2 425 641 IPR004873 -
Adu05g01474 642 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 15 642 - -
Adu05g01474 642 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 15 642 - -
Adu05g01474 642 Pfam BURP domain 427 639 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01474 Adu-Chr5 24194543 24197664 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01474 - - gmx:100776642 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01474 05 24194543 24197664 Adu05g01474 05 24194543 24197664 ECH
Adu05g01474 05 24194543 24197664 Adu03g03766 03 126282414 126309433 PCT
Adu03g03471 03 122106142 122109547 Adu05g01474 05 24194543 24197664 PCT