Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01473 ATGATAAATCCGTCCCTGACCTTTTTTTCTGCGGACATTTTCGTCCCTGAGgtgaagcgggtgaaggaagaaagggagcattccgacccatggcatccgacggagCTTGGCCACAAGTCCGATGGCCAGACCATCGAGTGGCTCCTTTGCCAGTCCGAGCCCTCAATCATCGCCGCCCCCGAAACCGGAACCACTCCCGCCAGCTTCTCCTCCATTTCCGTCTCCGCATGCGGTGGTGCTGGCTCTCTTTCTTCTCCTTCCTCAACTTCCGCATCATCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGTGCATACGCACTGACGACGACGCTTCCGCCAAGGACGATGATGTTATTTATGGCCACTTGTTTGTTGTCTCTGAGCTCGAAAGAATGAAGCTAAAGGTCTATGACACGGAAACAGACTCCTGGGATGCCATAGATGGCCCCCTTTGCCTGAGCAAATATGCAAGCCTTTTGCTGTCAATGCTTGCGATTGCCATATTTATGTCGTGGGCCGAAATCTTCATGTTGCTGTTGGTCATATCTCTAGACTGCTTCTAG 585 0.4752 MINPSLTFFSADIFVPEVKRVKEEREHSDPWHPTELGHKSDGQTIEWLLCQSEPSIIAAPETGTTPASFSSISVSACGGAGSLSSPSSTSASSSLDHKPLLAPTPFILGKCIRTDDDASAKDDDVIYGHLFVVSELERMKLKVYDTETDSWDAIDGPLCLSKYASLLLSMLAIAIFMSWAEIFMLLLVISLDCF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01473 194 Pfam TCP family transcription factor 35 89 IPR017887 -
Adu05g01473 194 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 35 130 - -
Adu05g01473 194 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 130 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01473 Adu-Chr5 24170462 24171350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01473 35 119 TCP Transcription Factor Family AT5G23280 60.227 8.53e-25 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu05g01473 TCP 9.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01473 K16221 - aip:110269354 171.014