Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01458 ATGGCTATCCACGACCATTCTTCCAACGTGACGCCATCTTCGTTCTCTGATTCTTCAAACTTTTCTTCGCCGCCATCCCCTCATGCCTCCGACTCCTTCCGTAGATCACTCAAGAAAAAGTCCGATTCAAATTCATCGTCTGACGATCCATCACCAAAACCGAGTCCACGGCCTCCGCGTTCTCCGCCGCCGCCGAAATCTCCACCACGGCCATCAAAGTCTCCACCACCACCACCCTCTCCGCGTCCACCAAAACACTCGCCTCCTCAAAAACCCCCCCGCCGCCGCCATCGCCAGTTCCGCCACCTCCGCCACCACGGGAAGAAGAAAGATCGAGGCGATGCCGGTTGGCCACAAGGTGGAAATGTACACTACTACTACAAACCAGGCGGGGCCAATGGTCCACAAGTAGGGAAGTACGGTTCACAAAAAAAACAGTCTACTCCGGTGAGAGGCAACTATGGAGGTTACGTGAGATCACCTTCAGAGCTACAACAAATGAGTGGGGGTATAATGGCTTATAGCTACGAAGAAATCGTGGAAGTAACGAACGGGTTTTCGAGTGAGAACGTAATAGGAGAAGGTGGGTTCGGGAGTGTGTACAAGGCTTTAATGCCCGATGGTAGAGTAGGAGCAGTGAAGATGCTGAAACCTGGTAGTGGCCAAGGAGAAAGAGAGTTTAGGGCTGAGGTTGACATTATTAGTAGGATTCATCATCGTCATTTGGTTTCTTTGATTGGTTATTGCATAGCTGAGCAACATAGAGTTCTTGTCTATGAGTTTGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAATAACTTACCTGTTTTGGATTGGCCGAATAGGATGAAGATAGCAAATGGCGCTGCAAGGGGCATAGCGTATCTGCATGAGGGCTGCAACCCAAGGATTATTCATAGGGATATTAAGTCCGCAAACATACTTTTGGATGGTGCTTATGAAGCACAGGTTGCAGACTTTGGACTTGCCAAACTAACTGATGACGCTAACACCCATGTATCAACCAGGGTGATGGGGACCTTCGGATACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTCCTGCTTGAGCTCATAACTGGAAGGAAGCCCGTTGATCCAAAGCGGCCCATCGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACATCTTCTTCTTGCAATGGGGACGCGTGCGTTTGGTGATCTAGAAGACCCAAGGCTTGAAGGACGCTATGTTCATTCTGAAATGTTAACCATGATTGAGGCTGCTGCCGCATGTGTTCGCCACTCCGCTCCTAAACGCCCCCGTATGGTTCAGGTGGCAAGAGCCTTAGAGTGTGGAGAACAACTAGATCTATCAAATGGGGTGAAATATGGTCAAAGCAGAATATATGATTCAAGCCAGTACATTAATGATATTATGAGATTTAGAAGGATGATGGCTGATGGCAATTTTAGCGGTTACGACTATGATATGTATAGTACAGAACACAGTTCAAGAGAGTTGTCTCCTTCTTTAGGGATGCCAACTAGTTCAGGTGGTAATTCAGAACCTAGATCTTTCAACAACCATAGGAGCTTCTCTGACTCTGAGAAACCATAA 1647 0.4766 MAIHDHSSNVTPSSFSDSSNFSSPPSPHASDSFRRSLKKKSDSNSSSDDPSPKPSPRPPRSPPPPKSPPRPSKSPPPPPSPRPPKHSPPQKPPRRRHRQFRHLRHHGKKKDRGDAGWPQGGNVHYYYKPGGANGPQVGKYGSQKKQSTPVRGNYGGYVRSPSELQQMSGGIMAYSYEEIVEVTNGFSSENVIGEGGFGSVYKALMPDGRVGAVKMLKPGSGQGEREFRAEVDIISRIHHRHLVSLIGYCIAEQHRVLVYEFVPNGNLSQHLHGNNLPVLDWPNRMKIANGAARGIAYLHEGCNPRIIHRDIKSANILLDGAYEAQVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPKRPIGEESLVEWARPHLLLAMGTRAFGDLEDPRLEGRYVHSEMLTMIEAAAACVRHSAPKRPRMVQVARALECGEQLDLSNGVKYGQSRIYDSSQYINDIMRFRRMMADGNFSGYDYDMYSTEHSSRELSPSLGMPTSSGGNSEPRSFNNHRSFSDSEKP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01458 548 MobiDBLite consensus disorder prediction 32 46 - -
Adu05g01458 548 Gene3D Phosphorylase Kinase; domain 1 157 261 - -
Adu05g01458 548 MobiDBLite consensus disorder prediction 88 109 - -
Adu05g01458 548 MobiDBLite consensus disorder prediction 1 30 - -
Adu05g01458 548 PANTHER RECEPTOR-LIKE KINASE 157 526 - -
Adu05g01458 548 MobiDBLite consensus disorder prediction 134 154 - -
Adu05g01458 548 MobiDBLite consensus disorder prediction 1 121 - -
Adu05g01458 548 Gene3D Transferase(Phosphotransferase) domain 1 262 473 - -
Adu05g01458 548 MobiDBLite consensus disorder prediction 514 538 - -
Adu05g01458 548 MobiDBLite consensus disorder prediction 514 548 - -
Adu05g01458 548 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01458 548 MobiDBLite consensus disorder prediction 51 87 - -
Adu05g01458 548 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 157 526 - -
Adu05g01458 548 CDD STKc_IRAK 192 460 - -
Adu05g01458 548 SMART serkin_6 186 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01458 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Adu05g01458 548 Pfam Protein tyrosine and serine/threonine kinase 189 387 IPR001245 GO:0004672|GO:0006468
Adu05g01458 548 SUPERFAMILY Protein kinase-like (PK-like) 162 459 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01458 Adu-Chr5 23440733 23445143 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01458 126 516 Trihelix Transcription Factor Family AT1G70460 62.060 7.30e-165 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Adu05g01458 PK_Tyr_Ser-Thr 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01458 - - lja:Lj2g3v1414850.1 601.668