Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01434 ATGGTGGTGGTGATAGAGCAGCAAGAGAATGAGGATCGAAACGCAAATCCCTCCAATACTGCTGGTAACGATGCTTCCGACGGTTTTGAAACGGCCAGCGACACCGACCTGGGCAGCGAAACCGGAGGTGATGACGTTGGCGCTAGCAGCCATGATCAACAGCTCGAACAACAGCAACATCAACAACAGCAGCCGAAGCCAGAGCATTCGGAGCCGGAACCTGAACAGAGTGTTTCTCCAAGTAATAGTTTCTCTAGAGATCCCTTGATCAATGAGGAATTGGAGAAGAAAGCATTGGTTCAAGCAAATGAGGCAAAGGCAGAAGGGAATAAGCTTTTTGTGGATGGGAAGTATGAGGAAGCATTATCCCAGTATGAACTTGCTCTACAAGTTGCACCTGACATGCCTTCATCTGTTGAAATACTCTCAATATGTCATGCAAACCGTGCTGTGTGCTTTCAGAAACTGGGAAAATATGACAACACAGTTAAAGAATGCACAAAAGCATTAGATCTGAATCCAGTGTATATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGCCGCTTGCTGCAGAAAAGCGGGAAATGATGAAGGAAGAGATGATTGGCAAGTTTCTGTTTTCATCTTTATCTTGGATTTCAATTATAGTTGCTATTGTATCATGTACTTCGCGTAGAACAGTGCATGGGCATTATTTCCTTACATTACCTTGA 816 0.4326 MVVVIEQQENEDRNANPSNTAGNDASDGFETASDTDLGSETGGDDVGASSHDQQLEQQQHQQQQPKPEHSEPEPEQSVSPSNSFSRDPLINEELEKKALVQANEAKAEGNKLFVDGKYEEALSQYELALQVAPDMPSSVEILSICHANRAVCFQKLGKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLEPLAAEKREMMKEEMIGKFLFSSLSWISIIVAIVSCTSRRTVHGHYFLTLP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01434 271 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 12 239 - -
Adu05g01434 271 MobiDBLite consensus disorder prediction 9 38 - -
Adu05g01434 271 ProSiteProfiles TPR repeat profile. 177 210 IPR019734 GO:0005515
Adu05g01434 271 SUPERFAMILY TPR-like 102 220 IPR011990 GO:0005515
Adu05g01434 271 Pfam Tetratricopeptide repeat 178 210 IPR013105 -
Adu05g01434 271 Gene3D Tetratricopeptide repeat domain 47 236 IPR011990 GO:0005515
Adu05g01434 271 SMART tpr_5 102 135 IPR019734 GO:0005515
Adu05g01434 271 SMART tpr_5 177 210 IPR019734 GO:0005515
Adu05g01434 271 SMART tpr_5 143 176 IPR019734 GO:0005515
Adu05g01434 271 MobiDBLite consensus disorder prediction 1 86 - -
Adu05g01434 271 Pfam Tetratricopeptide repeat 147 174 IPR019734 GO:0005515
Adu05g01434 271 MobiDBLite consensus disorder prediction 46 65 - -
Adu05g01434 271 ProSiteProfiles TPR repeat profile. 102 135 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01434 Adu-Chr5 22546337 22550425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01434 102 233 Calmodulin-binding Proteins AT3G25230 37.143 1.26e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01434 K24926 - gmx:100808386 294.278