Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01429 ATGTCAGGTATATTTACAGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACCGAGGGAGCATTTTTTTCTGAATCTGATATGTCAGATTATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACATCTTTGAAATTTAGTGAGAATGTTGTGGAGGAAATTGACAAATACCACTTTTCTACTTTGCATCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTAGTGGCGAGATTTACAGACAAATGTTTGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAAGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTACCCACATAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATCAGCACCTCACAGATATTTGGTCTTCTAGCTAGTCAAGCACGCAGGTACGAATTTGTTGGCGATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGCACACATGCGCTTTAACGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCCGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTTTCTCCAGAGCTGGATCAATGCGGGTTCTAAACATAGATAATACCGATGATTGCATAAAAGACATCCGTGAGATTTCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTGAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCTTTGGTGGAATATTCTAAACAACTGGCTACTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGATTTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGATGAAGGAGATAATCAACCTCACACAGGTGTAGCTAGAAATAGCAATCCGTATGTGCATCCAACCACTGGAGACTCAGGACAGCCATCTAAGAAGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACATTATTGAAGATGAAGCTAATGCTTCGGATGATGGCGACGTATATCCAGAACCGACGGCTGAGTTAGATAGTGATAATTAG 1554 0.4054 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEQDFRDEFTEGAFFSESDMSDYILEAAYAVDSVQDITSLKFSENVVEEIDKYHFSTLHLAFDFYMKYSKSKGFSARKSKTFKNSSGEIYRQMFVCHRQGFRMEKYYTMEKRKKEPRLETRTGCEARMDVKFVPESGKWHIFYFSDEHNHDLLDTQFSAMLPTHIKMSEADIMQMMNMLKSGISTSQIFGLLASQARRYEFVGDGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRAHMRFNEFNADYESTRGVPVMQTCIELLERYAAELYTHEIFLFFRPFFSRAGSMRVLNIDNTDDCIKDIREISRSLVLDRWTKKVKSALNDPSGFTRDAVVISRQSALVEYSKQLATVAAKVPERYEETRDLIMGLYSSYKAADEGDNQPHTGVARNSNPYVHPTTGDSGQPSKKKKRQRCSVCQMEGHKKTTCPWQKDIDNNIIEDEANASDDGDVYPEPTAELDSDN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01429 517 MobiDBLite consensus disorder prediction 432 517 - -
Adu05g01429 517 MobiDBLite consensus disorder prediction 439 457 - -
Adu05g01429 517 MobiDBLite consensus disorder prediction 458 473 - -
Adu05g01429 517 MobiDBLite consensus disorder prediction 1 22 - -
Adu05g01429 517 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 15 266 - -
Adu05g01429 517 MobiDBLite consensus disorder prediction 494 517 - -
Adu05g01429 517 Pfam FAR1 DNA-binding domain 101 191 IPR004330 -
Adu05g01429 517 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01429 Adu-Chr5 22494674 22497031 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01429 FAR1 2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01429 - - ahf:112720852 543.117