Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01418 ATGCCTTCTTCTTCTTCTTCATCGTTTCTTATTGTCTTGCTTTGTTGTTACCATGCACTTATTACCATTATCCCTTGCGCACTTGGTGACCCAAGAACGACAGAGGCAGCGCTATTGTGCTCCAACATAATTATATCCCCACCTGTTCGCCGAGATTTCATATCAAACTTCTGGGATGCCTTGAGCTCCATGACCCCTCTTGTTTCTAACAAAAAATTTGCAGCTCTTCACAAAGGCTCTCAAAATGCCACTGTCTATGCTTTTAGTGAGTGTATGAAAGATCTCTCTAAACCAGATTGTGATGTTTGCTTCTCTGAATCCAAAACAAAGATCTTAAGATGCTCGCCGTTTCAGAGAGGCACTATTGGTGGAAGACTCTTCCTTGATGGGTGCTACATGAGGTATGATCATAAAAATTTCTTCAATGATAGTAGTGTTAGTGGTGAAGATAAAACTGTGTGTGGAACCAAGGATTTTGGTGGGGATAGGAGTGTTTACAAGGCTAATGCTATGGAACTGGTGAGGAATTTGAGCTTGGAAGCACAAAAGAAAAATAATGTTTGGTTCTTCCATGCTGGGTCTGTGAATCATAGGAATGTGAGTGTTTATGGTTTGGCTCAGTGCTGGAAATTTGTGAATGAAAGTGGATGCAAGACATGTTTGGATGAAGCTGTTACTAGGATTGAATCATGTGCTTCAAAAGAAGAAGGAAGAGTGTTGAGTGTTGGTTGTTACTTGAGGTATTCAAATGACAAGTTCTATAATGATAATTCAAGCAATGTTGTTGTCCCTTTCGGAAAACAAGGACATAGTAACCTTCCTCTGATTGTGGCTGCATCATCTTCTTCCTTGGCTCTGCTACTGATCGTTGTAACGGTTACTTTCTTTGTAAGAATGAATATATTGAAGCAGAGAAGAGAAAGAAGAAAGTTTGGTGCGCTTTTGGAAACAGTGAACCAATCTAAACTAAATATGTCATATGAAGTTCTTGAACAAGCAACAAATTACTTCAATGATTCCAATAAGCTAGGAGAAGGAGGAACAGGTTCAGTTTACAAAGGAGTTCTGCCAGATGGAAAGATTGTGGCCATAAAAAGGCTTAGCTTCATCACAACACAATGGGCAGATCATTTTTTCAATGAGGTGAATTTGATAAGTGGGATTCAACACAAAAATCTTGTGAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTACCTAATGGGAGCCTCTCTGATCACTTCTGTGTTAGAAAGAAATCTGAAGGGTTGAATTGGGAAGTGAGGCATAAGATCTTGTTAggaactgcagagggcttggcctatcttcatgaggaatcacaaatgagaatcattcatagagatataaaattgggaaatgttctacttgatgaaaacttcacacccaagattgctgattttggacttgTTAGATTGTTCCCTGAAGACAATTCTCACCTTAGCACAACCATTGCTGGTACACTGGGTTACATGGCACCAGAGTATGTAATTCTTGGGAAGTTAACTGAGAAAGCAGATGTCTACAGTTTCGGAGTGTTAGCCATTGAAATTGTATCAGGAAAAAAAATTAGGTCAATTGTTCAAAATTCAATCTCCCTTCTACATGAGGTTTGGAGCCTGTATGAAACAAAGAAGCTATGTGAAATAGTTGATCTAAGCCTAGAGGGAAATTACCCTGCAGAGGAAGCATGTAAACTCCTTAAGATAGGGTTGCTTTGTGCACAAGCTTCTCCAGAGCTGAGACCATCAATGTCACAAGTTGTGAAAATGATTAAGGACAACAATCAGGAACAGATTTCTGAACCAACGCAGCCACCATTTCTAAACCGTTGCAGCGGCGAATTCAGCAGATCTATTTTAGATGCTGAAGATAGTTTTAATGCTGGATCCTATGCTCATCATCACTCTTCAGTCTATAACACGAGTGAAAATCTGATTCAACCTTTGTACATTTCAAATCGGAGTTCAGAATATTTTAGTGCATGA 2028 0.3698 MPSSSSSSFLIVLLCCYHALITIIPCALGDPRTTEAALLCSNIIISPPVRRDFISNFWDALSSMTPLVSNKKFAALHKGSQNATVYAFSECMKDLSKPDCDVCFSESKTKILRCSPFQRGTIGGRLFLDGCYMRYDHKNFFNDSSVSGEDKTVCGTKDFGGDRSVYKANAMELVRNLSLEAQKKNNVWFFHAGSVNHRNVSVYGLAQCWKFVNESGCKTCLDEAVTRIESCASKEEGRVLSVGCYLRYSNDKFYNDNSSNVVVPFGKQGHSNLPLIVAASSSSLALLLIVVTVTFFVRMNILKQRRERRKFGALLETVNQSKLNMSYEVLEQATNYFNDSNKLGEGGTGSVYKGVLPDGKIVAIKRLSFITTQWADHFFNEVNLISGIQHKNLVKLLGCSITGPESLLVYEYVPNGSLSDHFCVRKKSEGLNWEVRHKILLGTAEGLAYLHEESQMRIIHRDIKLGNVLLDENFTPKIADFGLVRLFPEDNSHLSTTIAGTLGYMAPEYVILGKLTEKADVYSFGVLAIEIVSGKKIRSIVQNSISLLHEVWSLYETKKLCEIVDLSLEGNYPAEEACKLLKIGLLCAQASPELRPSMSQVVKMIKDNNQEQISEPTQPPFLNRCSGEFSRSILDAEDSFNAGSYAHHHSSVYNTSENLIQPLYISNRSSEYFSA 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01418 675 Gene3D Phosphorylase Kinase; domain 1 298 412 - -
Adu05g01418 675 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Adu05g01418 675 CDD STKc_IRAK 343 606 - -
Adu05g01418 675 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Adu05g01418 675 Gene3D - 150 253 IPR038408 -
Adu05g01418 675 Gene3D - 39 140 IPR038408 -
Adu05g01418 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Adu05g01418 675 Pfam Protein kinase domain 338 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01418 675 ProSiteProfiles Protein kinase domain profile. 337 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01418 675 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01418 675 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 625 - -
Adu05g01418 675 Pfam Salt stress response/antifungal 159 250 IPR002902 -
Adu05g01418 675 Pfam Salt stress response/antifungal 53 137 IPR002902 -
Adu05g01418 675 ProSiteProfiles Gnk2-homologous domain profile. 33 140 IPR002902 -
Adu05g01418 675 Gene3D Transferase(Phosphotransferase) domain 1 413 619 - -
Adu05g01418 675 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 24 625 - -
Adu05g01418 675 SUPERFAMILY Protein kinase-like (PK-like) 320 605 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01418 Adu-Chr5 22067329 22070932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01418 27 502 Receptor kinase-like Gene Family AT1G70530 55.556 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu05g01418 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01418 - - aip:107643328 1308.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01418 05 22067329 22070932 Adu05g01418 05 22067329 22070932 ECH
Adu05g01418 05 22067329 22070932 Adu03g03734 03 125886491 125889784 PCT