Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01412 ATGATGAAGAACACCATGGCTTCTCTTACTCATCAACTCCCTCTTCTGCTTACCTTTGTGGCATCATATGCATTTGTTCTTACCACAACTAGTGTGTTCTCATCGAAAGTTTCAATGAAAGAAACAATTTTGGAACCTTTCAAGTGCTCCACAAACATAAAAACATGCAATGCCTCACTCTACCACATAACCTACGGGGATAATGATGATGACCAAACCATACAACATTACATATCTTCCAACTACACAAACTCCTCCCAAATCAGACCAATCACACGTGGCACAAGACAAGACCACCTCATAACAGTGCCTTGTTCTTGCAGAAACAACAACAACCTCAACGGTTATTACTATGACACAACCTACACTGTGAAGCCAAATGATAATTTCTATGACATTAATAACTTTGTTTACAGTGGTCAAGCGATGCTTATAAATGGTGTTTTGTACCCGGGTCAGAATCTGAGTATTCATATTCCCTGTGGGTGTTCAGAAATTGAGTCACAAATTGTTGTGACTTACACGGTTCAAAGAAATGATACCTCATCTGGAATAGCTAAGCTTTTGAATTCTACGGTTGCTGAGATGGAGAGTGTGAATCATCTTTTGGATCAGAACCCATCATACATAGATGTGGGTTGGGTTTTGTTTGTTCCTAGCCATTTTAATGGAATTCCACTGCCTCCAACAAAAGAAAAGAAACCAAAGTGGCAGATAATCACTGGGGTCTTAGTGAGTGTGACATTACTGTCAATGATTGCCGTCATCTTTCTCATTCTCAGGAGAAATAGGGATAACGCAGCATCCGCCACAAATAATCCAAAAAGTGTCACTAAAAGATCGATTTCCAAAAAGAACTCTGACATTCATAAAGAATACATGCAAGATGCTACATCATTTGAGTCAGAAAGACCAGTAATTTACTCAATTGAGGAGATAGAAGATGCCACAAATAACTTCGATGAAAACAGAAGAATTGGGGTTGGTGGATATGGCAGTGTATATTTTGGAATGTTAGGCCACAAGGAGGTTGCTGTGAAGAAGATGAAGTCCAATAAATCCAAGGAGTTCTTCGCAGAACTCAAGGCCTTATGTAAGATCCATCACATAAACATTGTGGAGTTGTTAGGGTATGCAAGTGGAGATGACCACCTTTATTTGGTGTACGAGTATGTTGCAAATGGATCTCTGAGTGATCATCTTCATGATCCTTTACTTAAAGGTCATCAGGCTCTATCTTGGTGTGCTAGGACTCAGATTGCATTGGATGCAGCAAAAGGAATTGAATACATACATGATTACACAAAAGCACAATATGTTCACCGTGATATAAAGACTACTAACATTCTTCTTGATCAGAAACTCAGAGCCAAGGTAGTAGCAGATTTTGGCCTCGCAAAACTGGTGGAACGGACCAATGATGAAGAATTCATTGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCCGAATCTGTGAAAGAATTACAAGTAACCATAAAAACGGATGTGTTTGCATTTGGAGTAGTTCTATCAGAGCTGATAACAGGAAGACGTGCGCTATTTCGTGACAGCCAAAAACCCAATCAAATGGAATCTCTTATTTCACTTGTTAAGAAAATATTCCAAGATAATGATCCCGTCACTGCTTTAGAAAATGTCACAGATATGAATCTTCAACATAACTATCCTATAGACGCTATCTACAAGATGGGAGAAATAGCAGAGTGGTGCATGAGGGAGGAACCAATGGAGAGGCCTGAAATGAAGGAGATAGTTGGCGCGTTGTCAAAGATAGTTATGACATCCATCGAGTGGGAAGCATCGCTCGGAGGAGATAGCCAAGTTTTCAGCGGCGTATTTATTGGAAGATGA 1878 0.4004 MMKNTMASLTHQLPLLLTFVASYAFVLTTTSVFSSKVSMKETILEPFKCSTNIKTCNASLYHITYGDNDDDQTIQHYISSNYTNSSQIRPITRGTRQDHLITVPCSCRNNNNLNGYYYDTTYTVKPNDNFYDINNFVYSGQAMLINGVLYPGQNLSIHIPCGCSEIESQIVVTYTVQRNDTSSGIAKLLNSTVAEMESVNHLLDQNPSYIDVGWVLFVPSHFNGIPLPPTKEKKPKWQIITGVLVSVTLLSMIAVIFLILRRNRDNAASATNNPKSVTKRSISKKNSDIHKEYMQDATSFESERPVIYSIEEIEDATNNFDENRRIGVGGYGSVYFGMLGHKEVAVKKMKSNKSKEFFAELKALCKIHHINIVELLGYASGDDHLYLVYEYVANGSLSDHLHDPLLKGHQALSWCARTQIALDAAKGIEYIHDYTKAQYVHRDIKTTNILLDQKLRAKVVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGRRALFRDSQKPNQMESLISLVKKIFQDNDPVTALENVTDMNLQHNYPIDAIYKMGEIAEWCMREEPMERPEMKEIVGALSKIVMTSIEWEASLGGDSQVFSGVFIGR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01412 625 ProSiteProfiles Protein kinase domain profile. 320 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01412 625 SMART serkin_6 320 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01412 625 CDD LysM 172 218 IPR018392 -
Adu05g01412 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Adu05g01412 625 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Adu05g01412 625 Pfam LysM domain 174 219 IPR018392 -
Adu05g01412 625 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 27 625 IPR044812 GO:0019199|GO:0045087
Adu05g01412 625 SUPERFAMILY Protein kinase-like (PK-like) 303 597 IPR011009 -
Adu05g01412 625 Gene3D Transferase(Phosphotransferase) domain 1 392 610 - -
Adu05g01412 625 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 27 625 - -
Adu05g01412 625 Pfam Protein kinase domain 321 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01412 625 SMART LysM_2 173 219 IPR018392 -
Adu05g01412 625 Gene3D Phosphorylase Kinase; domain 1 297 391 - -
Adu05g01412 625 SUPERFAMILY LysM domain 172 219 IPR036779 -
Adu05g01412 625 ProSiteProfiles LysM domain profile. 172 218 IPR018392 -
Adu05g01412 625 Gene3D LysM domain 166 223 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01412 Adu-Chr5 21782510 21786822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01412 300 625 Receptor kinase-like Gene Family AT1G51940 50.904 2.20e-112 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Adu05g01412 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01412 - - gmx:100800907 825.083