Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01409 ATGCGTCACCGCTGTTCGCACTGTCAGTTTTGCGCAGGGGAAACCATGGCCGTTGAGGAGATCGCGCGCAAGGGAAATCGTCGAGGAGCTTCCGTCGTCGCCGCGTGCTGGGCTCGCCGTCGTTCTGCCCGCGCAGTTGCTGCGTTGCCGGAGCTCCTCGCTGCCGCTGCTGGCCCCGGAAACCGCCTTTCAAGCCTGTGTCTGTTATACGGTCACCGTGAGTCTCTTTGCCGCCGTCCAAGCTGCCATCAGAAGGATCCACCACAGCCTCCTCTGTTCTTGTCTTCGAATCAGTACTGCCCTTTTCCAGTTTCAATCCCAATTCTGCTATTTCTGAATATAGTTGTTTCTGCATTTGATTCCATCAAGTTCGATGTTGCTGCGAGAGTAATCGGAGTTGGTGATGCTGCAATCGTCCCGGTTGTGTTAGAATTGCCAGTGCTATTgtggttagagaatctggactggttagtggatgtaggtttTGTTTTGTTTACTGCTGCTGTTCGGAATGAATTTGTCTTTCCTCTGAAAGCTTCCCTGGATGAACTTGTTTATTGTGCTGTTTTGGTGTTGAATTCTGGACTTGTGATTGCTTGGGAGCATGGCTGTCACTATAGTGAAGCAGGTTCCATTGTAGGTCTAAACTTTGCTGTTTATGAGTCTTTGAAAGATTGGTTAGTTAAATCCAATCCATTTGGTCTAGTGCAAGATTCTGAGTTGAGTGTGACAACTCGCCTGAGTCAATGGATTACTATAATCAGAAATGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTGGAAGCTGTGAAACATTTTGGTCCTGGTCCTAGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGAAAGAACAACAAAGGACTTGGTGtttaa 939 0.4601 MRHRCSHCQFCAGETMAVEEIARKGNRRGASVVAACWARRRSARAVAALPELLAAAAGPGNRLSSLCLLYGHRESLCRRPSCHQKDPPQPPLFLSSNQYCPFPVSIPILLFLNIVVSAFDSIKFDVAARVIGVGDAAIVPVVLELPVLLWLENLDWLVDVGFVLFTAAVRNEFVFPLKASLDELVYCAVLVLNSGLVIAWEHGCHYSEAGSIVGLNFAVYESLKDWLVKSNPFGLVQDSELSVTTRLSQWITIIRNDVLMEKDLFCPVRLEAVKHFGPGPSVPHSHTKPYVRSKGRKFERARGRKNNKGLGV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01409 312 MobiDBLite consensus disorder prediction 289 303 - -
Adu05g01409 312 Pfam Ribosomal protein 60S L18 and 50S L18e 271 309 IPR021131 -
Adu05g01409 312 PANTHER 60S RIBOSOMAL PROTEIN L18 270 310 IPR000039 GO:0003735|GO:0005840|GO:0006412
Adu05g01409 312 Gene3D - 264 310 - -
Adu05g01409 312 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 270 310 - -
Adu05g01409 312 MobiDBLite consensus disorder prediction 280 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01409 Adu-Chr5 21734603 21737831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01409 271 312 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 71.429 1.80e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01409 K02883 - tcc:18613591 81.2629