Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01384 ATGGAGGTCGATATAGTGGAACCTCTAGAATGTGTAGCCTCGGACGATTCAGAAAACTTTTCATACGAACAAGAAGACTTAGCCGGCGATGTCGCAGGCCATGCTCACGAGCCGAGCAAGGTGAGCAAGTTGGATCGTCAAATTCTGCCATGGATGTTTATCGTCGCGCAGCTGTCGGATGTTACAGATGTTGGAAGTGATGAGATGGAGCTTGGTGATGAGTTACCAGATCATGGTTGCTTACAAGAAGATGAGATACCAAGAGTTGGAATGCGGTTTGCTCATTTACAGATGGCTCATGACTTTTATGTGACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGATAAGATCACAAAGGCTCCCATTAACCAAGCTATACACTGTAATCATGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGATGTGCAAGACTGGGTTTTGCTCAAGgctaactgcaGAGTTTCTGCAGTTGATGAACAGGGTCCATTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAATGATACTATTCTATGCATTCCATACGATGTTCACTTTGACCGTTCCACACAGGAGCTTCGTTGTGAGTGCAATCTTTTTGAGAGTTCAGGTGTGTTGTGCTGTCACTGCCTTGAAGTTTTTCATTCGTATAAAGTGTACAAAGTACCTTCCTGTTATATTCTTCCTCGATGGAGCAAGAACATAAAGCGCAAGCATACGTATGTCAAAAGTAGCCATGATGTCAGTCGGTCGGATGAGAGTCATGTTGCATTCAGGGGACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGTATTGCTGCATGTTGCTTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCAAAAAAGAGGTCCGAGAGCGTGGCAGAGACTCAGACCAACATTGGCTCTCAGAATTCGAACGATGTCGGTGTTGATGACATCCAAAGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTTGGCTATGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACCCCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGCTGTTTCTGGCTTGAATGTTCCCGAACAAGCCGGTGGTTTCATGTCTTTGTTAAGCTCCTTCAATAAAAAGTGGGATTAG 1299 0.4473 MEVDIVEPLECVASDDSENFSYEQEDLAGDVAGHAHEPSKVSKLDRQILPWMFIVAQLSDVTDVGSDEMELGDELPDHGCLQEDEIPRVGMRFAHLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPINQAIHCNHDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKANCRVSAVDEQGPLVCVKVEEEKLLNDTILCIPYDVHFDRSTQELRCECNLFESSGVLCCHCLEVFHSYKVYKVPSCYILPRWSKNIKRKHTYVKSSHDVSRSDESHVAFRGLCAHFYNVAQEFLGDDEETVLLHVALEETRAKLATHRAKKRSESVAETQTNIGSQNSNDVGVDDIQSPSKVTTKGRPKSKRLGYALEKSIKNSRRRKQKNSPPVVRPHTFQDINHCAVSGLNVPEQAGGFMSLLSSFNKKWD 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01384 432 MobiDBLite consensus disorder prediction 335 363 - -
Adu05g01384 432 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 69 170 IPR031052 GO:0006355
Adu05g01384 432 Pfam FAR1 DNA-binding domain 101 177 IPR004330 -
Adu05g01384 432 PANTHER OS03G0843700 PROTEIN 69 170 - -
Adu05g01384 432 PANTHER OS03G0843700 PROTEIN 169 331 - -
Adu05g01384 432 ProSiteProfiles Zinc finger SWIM-type profile. 212 248 IPR007527 GO:0008270
Adu05g01384 432 MobiDBLite consensus disorder prediction 325 398 - -
Adu05g01384 432 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 169 331 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01384 Adu-Chr5 21236718 21240855 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01384 FAR1 7.4e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01384 - - aip:107640004 514.612