Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01383 ATGCAGGTCAAAATCTTTGGGATAAGAGGTTGCTGTTTTGGCATTGCAAACATGATTTTGGTTAAGAGAATGAGAGAAACATTATACTCTTCCCTTATTCTTCAGGATATATCATTTTTTGACTCTGAAACAGTTGGTGATTTGACAAGTAGACTCGGGGCAGATTGTCAACAAGTGTCTAGGGTTATTGGAAATGATCTTAACTTGATATTGCGCAATGTTCTTCAGGGGACAGGTTCATTAATCTACTTGGTGATTTTGTCTTGGCCACTTGGTTTATGTACGTTGATGATATGCATCCTGTTAGGAGCAGTTATGGTACATTATGGAAGGTACCAGAAAAAGGCAGCAAGGCTGATCCAAGAAGTCACTGCTTCTGCAAATGATGTAGCTCAAGAGACCTTGTCTCTCATTCGAACTGTCCGTGTTTATGGAACAGAAGAAGTAGAACATGGAAGGTACAAATGGTGGCTGGAGAAATTAGCTGACATAAGCCTGCGACAAAGTGCTGCATATGGGTTTTGGAATTTAAGCTTCAATGCTCTTTATCATTCAACTCAGGTTATCGCTGTGCTGTTTGGAGGGATGTCTATTCTTGCTGGACATATTACTGCTGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTAATTTATTCAACCTGGTGGGTGGGAGACAATATTTCCAATTTGATGCAATCTGTTGGAGCTAGTGAAAAAGTATTCCATTTAATGGATCTCTTACCTAGCAGCCAATTCACAGAAAGAGGAGTAAAGTTGCAGGGGTTGATGGGGCAAATCGAGTTTCTAAATGTATCTTTTCGCTACCCTTCAAGGCCAACGGTATCTGTGGTGCAACATGTAAACTTTGTGGTCCATCCCAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACACTGGTGAACCTTTTGCTTCGTCTCTATGAGCCGACAAGTGGCCAGATTTTGGTAGATGGCATTCCTATTAAAGACTTCGACATCATGTGGTGGAGAGGGAGAATAGGATATGTTGGACAGGAACCCAAGCTTTTCCGGATGGATATTAGTTCAAACATCAGATATGGATGTACTCGCGATGTAACACAGGAGGATGTTGAATGGGCTGCAAAGGAGGCCTATGCTCATGATTTCATCACAGCACTTCCTAACGGTTATGAAACAGTTGTTGACGACGATCTATTAAGTGGGGGTCAAAAGCAGCGAATCGCTATTGCTAGAGCCATCCTTCGGGACCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCACTGGATGCTGAGAGTGAACATAACGTTAAGGGTGTTCTTCGATCCGTCAGAAGTGACTCTACATCAAGGAGAAGTGTCATAGTCATTGCACACAGGCTTTCCACCATACAAGCCGCTGACAGGATTGTGGTAATGGATGGTGGTCAAGTTGTTGAGATTGGAAGTCATAGAGAACTTCTCCTAAAAGATGGTTTATATGCTCGGTTGACTCGAAAACAGGCAGATGCCATGGCATGA 1542 0.4248 MQVKIFGIRGCCFGIANMILVKRMRETLYSSLILQDISFFDSETVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGSLIYLVILSWPLGLCTLMICILLGAVMVHYGRYQKKAARLIQEVTASANDVAQETLSLIRTVRVYGTEEVEHGRYKWWLEKLADISLRQSAAYGFWNLSFNALYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDNISNLMQSVGASEKVFHLMDLLPSSQFTERGVKLQGLMGQIEFLNVSFRYPSRPTVSVVQHVNFVVHPSEVVAIVGLSGSGKSTLVNLLLRLYEPTSGQILVDGIPIKDFDIMWWRGRIGYVGQEPKLFRMDISSNIRYGCTRDVTQEDVEWAAKEAYAHDFITALPNGYETVVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRSDSTSRRSVIVIAHRLSTIQAADRIVVMDGGQVVEIGSHRELLLKDGLYARLTRKQADAMA 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01383 513 Pfam ABC transporter transmembrane region 7 219 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g01383 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 508 IPR027417 -
Adu05g01383 513 SMART AAA_5 295 484 IPR003593 -
Adu05g01383 513 CDD ABC_6TM_TAP 7 242 - -
Adu05g01383 513 Pfam ABC transporter 287 434 IPR003439 GO:0005524
Adu05g01383 513 ProSitePatterns ABC transporters family signature. 406 420 IPR017871 GO:0005524
Adu05g01383 513 Gene3D - 258 512 IPR027417 -
Adu05g01383 513 Gene3D ABC transporter type 1, transmembrane domain 5 247 IPR036640 GO:0005524|GO:0016021
Adu05g01383 513 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 268 507 IPR003439 GO:0005524
Adu05g01383 513 PANTHER ABC TRANSPORTER B FAMILY 7 512 - -
Adu05g01383 513 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 8 234 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Adu05g01383 513 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 7 512 - -
Adu05g01383 513 SUPERFAMILY ABC transporter transmembrane region 7 250 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01383 Adu-Chr5 21228048 21234478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01383 23 511 Calmodulin-binding Proteins AT2G36910 34.531 2.77e-72 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01383 - - gmx:100775951 890.567