Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01374 atggctctGGGCCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAGGCCATTGGAAAAGTGAGGCATAAGAATTTGGTACGTTTAGTTGGATACTGTGCACAAGGTGCTAAGAGGATGCTTGTTTATGAATACGTTGACAATGGAAATTTGGAGCAGTGGCTACATGGTGATGTAGCTGCTAAGGGTAAAACCTCGTCTATTTCTACCCTTACTCAGGAATCATTTTAA 228 0.4079 MALGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAQGAKRMLVYEYVDNGNLEQWLHGDVAAKGKTSSISTLTQESF 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01374 75 Pfam Protein tyrosine and serine/threonine kinase 6 61 IPR001245 GO:0004672|GO:0006468
Adu05g01374 75 SUPERFAMILY Protein kinase-like (PK-like) 5 58 IPR011009 -
Adu05g01374 75 PANTHER OS01G0323000 PROTEIN 4 60 - -
Adu05g01374 75 Gene3D Phosphorylase Kinase; domain 1 2 46 - -
Adu05g01374 75 PANTHER OS03G0227900 PROTEIN 4 60 - -
Adu05g01374 75 ProSiteProfiles Protein kinase domain profile. 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01374 Adu-Chr5 20887118 20887650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01374 4 62 Receptor kinase-like Gene Family AT1G55610 52.542 4.43e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Adu05g01374 PK_Tyr_Ser-Thr 2.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01374 - - lang:109351508 115.161