LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g01337	ATGTCTCGCTCCCTTAACAGCAGAACTTTATTCTTGATTCTAATCTCAACTATGCTCATGAAGCACGGTAATTCAATGCCAACATACAATTATCATGACTGTAAAGATCCATTATTGGAGAATGCAACCACCGGTGCCATTTTCCAATCTGATCTAACTTCTCTTTTGAGTCCTTTATCTTTAGCGGCTTCCTCTAAGAGCTTCCACAAGGCTAATGTTTCCACAAGGCTGTATGGCCTCTTCCTCTGCAGGGCTGATGTGTCGCAGGACACCTGCAAAAACTGTACCATAACTGCCAGCATAGAAATCAAAAGCAAGTGCGCATCGAATTCTAGCGCAGTAATCTGGTACGACGAATGCATGCTTAGGTACTCCAAGGAACAGTTTTTTGGGGTGGCACAAACTAAGCCATTAGTATTCGCTTGGAACATTGACGACAACAATAGCACTTCACCTACTGAAACTCATCTCAAGATAGATACGGGTTGTGTTGGGTGGCGCTTACTGGCTCCTACTTGCACTATAAGGTACGAGAAGGATATCTTCTATGATAGTTTAGAGCCACTAGTATCACCTAATACTAGCAAACCGATACTACCATCGAAAGGTCCGATACTACCATCGAAAGATAACAGAAATCGCACTGCAAAACTCCTTATACTCCACATGGTCATTCCAATTGCGGTTTTTATGCTCTTCTGTCTTATCTGGTCAGCTCAACCCAAGGAAAGACGAAATCAAGGGGAACAGCTTACCAATTTAATTCAAGTAAATAACTTGAAAAGTTCAAGTAGGTCGTACTTTAAGGATCAAGGAATGATTGCACTCGAAGACAACAAAGGAGAAATACAGTGCTTTAGTTTGAGCACGATTAAGGTTGCTACCAACAGTTTTTCTGATGACACTAAGCTAGGTGAAGGTGGCTTTGGGCCCGTTTTCAAGGGGAAGTTAAATAATGGAAAGGAAATAGCAGTTAAAAGGCTTTCATTCAAATCAAGACAAGGCATTGAAGAATTCAAGAATGAAGTGACGTTGATTGCAAAACTTCAACACAAAAATCTTGTTAGGCTCTTGGGATGCTGCCTTGATAGAAACGAAAAGCTTCTTGTCTATGAGTACATGGCCAACACCGGTCTCGATGCTTTTCTGTTTGATCAAAACAAACGTGGAAAGCTGGACTGGCCTAAGCGGGAAAAAATTATAAATGGAATTGCAAGAGGTCTTTCATATCTACACGAGGATTCCAGGCTGAAAATTATTCATAGAGATTTGAAAGCTAGCAATGTATTGTTAGACCAAGACATGAATCCCAAGATATCAGATTTTGGGACTGCTAGAATATTTTATAGCGATCAAATTGAAGCAAGCACCGAAAGGGTTGTTGGTACATATGGTTATATGGCACCAGAATATGCTTTGGAAGGGTCATTTTCGGTCAAATCTGATGTTTACAGCTTTGGGGCATGGCGACTCTGGAGCGAAGGCAAGGAGCTGGAATTTCTGGATCATGTCCTGGTCAACGCTTGCCCCATAAATGTGGCGTTGAGATGGATTCATATTGGCCTGTTGTGTGTTCAAGAAAGGCCCAAAGACAGGCCCACCATGTCCTCGGTTATTTTGATGCTTGGAAGCACTACAGCCCTTCCTCAACCACTTGCACCTCCATTTTCTTTAAGCAACTATTATGACAATACAAGTGACGAATTTTCAATAACGGAAGAAAAAGAAGAGGAGGTGGAAGAAGGGGAGGATGATAATTCCAACTCTTTTTCAGtaaaattatag	1785	0.414	MSRSLNSRTLFLILISTMLMKHGNSMPTYNYHDCKDPLLENATTGAIFQSDLTSLLSPLSLAASSKSFHKANVSTRLYGLFLCRADVSQDTCKNCTITASIEIKSKCASNSSAVIWYDECMLRYSKEQFFGVAQTKPLVFAWNIDDNNSTSPTETHLKIDTGCVGWRLLAPTCTIRYEKDIFYDSLEPLVSPNTSKPILPSKGPILPSKDNRNRTAKLLILHMVIPIAVFMLFCLIWSAQPKERRNQGEQLTNLIQVNNLKSSSRSYFKDQGMIALEDNKGEIQCFSLSTIKVATNSFSDDTKLGEGGFGPVFKGKLNNGKEIAVKRLSFKSRQGIEEFKNEVTLIAKLQHKNLVRLLGCCLDRNEKLLVYEYMANTGLDAFLFDQNKRGKLDWPKREKIINGIARGLSYLHEDSRLKIIHRDLKASNVLLDQDMNPKISDFGTARIFYSDQIEASTERVVGTYGYMAPEYALEGSFSVKSDVYSFGAWRLWSEGKELEFLDHVLVNACPINVALRWIHIGLLCVQERPKDRPTMSSVILMLGSTTALPQPLAPPFSLSNYYDNTSDEFSITEEKEEEVEEGEDDNSNSFSVKL	594

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g01337	594	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	488	564	-	-
	Adu05g01337	594	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	32	150	-	-
	Adu05g01337	594	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	165	487	-	-
	Adu05g01337	594	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	419	431	IPR008271	GO:0004672\|GO:0006468
	Adu05g01337	594	PANTHER	PROTEIN, PUTATIVE ISOFORM 1-RELATED	488	564	-	-
	Adu05g01337	594	Pfam	Salt stress response/antifungal	40	126	IPR002902	-
	Adu05g01337	594	Pfam	Protein tyrosine and serine/threonine kinase	302	539	IPR001245	GO:0004672\|GO:0006468
	Adu05g01337	594	ProSiteProfiles	Gnk2-homologous domain profile.	30	129	IPR002902	-
	Adu05g01337	594	SUPERFAMILY	Protein kinase-like (PK-like)	283	570	IPR011009	-
	Adu05g01337	594	SMART	serkin_6	298	542	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu05g01337	594	MobiDBLite	consensus disorder prediction	569	594	-	-
	Adu05g01337	594	Gene3D	Phosphorylase Kinase; domain 1	273	373	-	-
	Adu05g01337	594	Gene3D	-	28	129	IPR038408	-
	Adu05g01337	594	Gene3D	Transferase(Phosphotransferase) domain 1	374	548	-	-
	Adu05g01337	594	ProSiteProfiles	Protein kinase domain profile.	298	553	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu05g01337	594	CDD	STKc_IRAK	304	542	-	-
	Adu05g01337	594	MobiDBLite	consensus disorder prediction	570	585	-	-
	Adu05g01337	594	PANTHER	PROTEIN, PUTATIVE ISOFORM 1-RELATED	32	150	-	-
	Adu05g01337	594	PANTHER	PROTEIN, PUTATIVE ISOFORM 1-RELATED	165	487	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g01337	Adu-Chr5	20021766	20024630	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu05g01337	164	564	Receptor kinase-like Gene Family	AT4G05200	44.186	6.27e-113	351

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Adu05g01337		PK_Tyr_Ser-Thr	1.6e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g01337	-		-	adu:107488599	928.702