LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu05g01336	ATGGACAAGGACAAGGACACACCTTTAGTTATGTATATGTTTGTCATTTGTATGTTATTGTTATGTGTTGGAAGCAGCACAGACCCTATTGACACATATTGTCCAACTGAATTCCCATTATATAGCAGCAACAGCACATTTGACAATAACCTGAAGCTTCTTTTGGGGTTGCTGCCCTCCAACACGGCTTCCAAGAATGGCTTCTACAACACATCCGTGGGAGATGGGCAAGACAAGGTGTACGGACAAGCACTGTGCAGAGGAGACATCACCAACTCCACAGTCTGCAAGGAATGCATTCAGAAAGCAAGCCAAGATTTAACAAAGATGTGCAACAGTGAAGATGCAATCATATGGTATGAGCTTTGCCAAGTCCGCTACTCCTTTCAGATGTTCTTCACGAGTATGACTTACACCGGGAAGTATCCTAACCATAATCTTAAGGAGAAGAATATCTCGCACACTTCTGGATTTGACCAAGTCTTGGCATATCTGATGAACAATCTCTCACAAGAAGCAGCTTTTATTCCTGCCAACAACATGTTTGCAGCAGGGGAGATTCAATATTCTGGTTCTGATGGTATCAAGAACAAGAAGCTTTATGGACTAGTCCAGTGTACCAGGGATATCTCTGAAGGAGACTGTGCCACTTGCTTGAGTTCTGCCTTAACAGAACTTACTCAATGCTGCTCCTTCCGAGAAGGCGGTATCATTCTTAGTCGGACTTGCAATGTGAGGTTTGAATCATACAGGTTCTTCAACCAGTCATCAGCAAAGATGCTGCTCTTTCCAACTTCCAAAGGAGGGGGGAAATGGAAGCCATGGATGTTTGCATTGACAATTGTTGGTTCACTCTTAGTATTAGCAGTTACTATTTTGCTGTGCACTGCTTGTCTGCTCCGCAAAGGGGACACAGGGAGAGATGAAGAAAGGATCGAAAGGACGCTGCTACAACAGTTGGCAACCTCCAAGAGCGTAGCAGTTACACAGGAAGGTGACCTGATTAGCTCTGATGAACTGTTGTTCATGAACTTAGCAACCATTAAGGATGCCACTGATGACTTCTCTGATACAAATAAACTGGGACAAGGAGGATTTGGTGCAGTGTACAAGGGTGTTCTACCAGATGGCAGTGAAGTTGCGGTTAAAAGGCTTTCAAAAAAGTCTTGGCAAGGGATAGAGGAATTGAAAAATGAGGTCATACTCATTGCCAAGCTTCAGCATAAGAATCTAGTGAGGCTGTTGGGGTGTGGCTTAGAGGGGGATGAAAAATTTCTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGATCCAGAGAAACGTTCCGagtttgattggcatacttggtatgggattatcaatggcattgcgagaggactgctttatcttcatgaggagtctcggcttaaaatcattcacagggatttaaagccaaacaatgtgttgttggatcatgaaatggttgccaaaatatcagattttggTATGGCTAGGATATTTTTCGAGAATCAAAATACAGCAAACACAAAGAGAGTTGTGGGAACATATGGATATATGGCTCCCGAATATGCAATGGAAGGACTCTTCTCAGTAAAATCGGATGTGTTCAGCTTTGGTGTCATGCTGCTTGAAATAATCAACGGGAAAAGAAACAGTGGGTTCTACACAACAGAACTTGCCCCAACACTACTGGCATATGCATGGCAGCTGTGGAATGAAGAGAGGAAGTTGGAATTTGTGGATCCAGTGTTGTTGGAATCGTGTATGGCCTGTGAAGTTGTGAAGTGCATGCACATTGGGCTTCTGTGTGTGCAGGAAGATCCGGAGCTGAGGCCTAACATGTCAAGCGTGGTGGTTCTCCTAGGAAGTGAACAAATGGCTCTTCCAAAACCAAGTCAACCAGTATTTTCATTGGGTAGGGCGTTTCATGTTGATCAAGATCCAGGTCCAGCCACTACAACCAATCCTTCTATGAATGGGGGGAGTACATTGTCCAGTGTCTTACCTAGATGA	2028	0.4043	MDKDKDTPLVMYMFVICMLLLCVGSSTDPIDTYCPTEFPLYSSNSTFDNNLKLLLGLLPSNTASKNGFYNTSVGDGQDKVYGQALCRGDITNSTVCKECIQKASQDLTKMCNSEDAIIWYELCQVRYSFQMFFTSMTYTGKYPNHNLKEKNISHTSGFDQVLAYLMNNLSQEAAFIPANNMFAAGEIQYSGSDGIKNKKLYGLVQCTRDISEGDCATCLSSALTELTQCCSFREGGIILSRTCNVRFESYRFFNQSSAKMLLFPTSKGGGKWKPWMFALTIVGSLLVLAVTILLCTACLLRKGDTGRDEERIERTLLQQLATSKSVAVTQEGDLISSDELLFMNLATIKDATDDFSDTNKLGQGGFGAVYKGVLPDGSEVAVKRLSKKSWQGIEELKNEVILIAKLQHKNLVRLLGCGLEGDEKFLIYEFMSNKSLDQFIFDPEKRSEFDWHTWYGIINGIARGLLYLHEESRLKIIHRDLKPNNVLLDHEMVAKISDFGMARIFFENQNTANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVMLLEIINGKRNSGFYTTELAPTLLAYAWQLWNEERKLEFVDPVLLESCMACEVVKCMHIGLLCVQEDPELRPNMSSVVVLLGSEQMALPKPSQPVFSLGRAFHVDQDPGPATTTNPSMNGGSTLSSVLPR	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu05g01336	675	MobiDBLite	consensus disorder prediction	653	675	-	-
	Adu05g01336	675	Pfam	Salt stress response/antifungal	40	129	IPR002902	-
	Adu05g01336	675	Pfam	Salt stress response/antifungal	150	250	IPR002902	-
	Adu05g01336	675	Gene3D	-	28	132	IPR038408	-
	Adu05g01336	675	Gene3D	-	140	252	IPR038408	-
	Adu05g01336	675	Pfam	Protein tyrosine and serine/threonine kinase	358	624	IPR001245	GO:0004672\|GO:0006468
	Adu05g01336	675	MobiDBLite	consensus disorder prediction	651	675	-	-
	Adu05g01336	675	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	476	488	IPR008271	GO:0004672\|GO:0006468
	Adu05g01336	675	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	12	655	-	-
	Adu05g01336	675	Gene3D	Transferase(Phosphotransferase) domain 1	431	635	-	-
	Adu05g01336	675	CDD	STKc_IRAK	361	623	-	-
	Adu05g01336	675	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	12	655	-	-
	Adu05g01336	675	Gene3D	Phosphorylase Kinase; domain 1	316	430	-	-
	Adu05g01336	675	ProSiteProfiles	Gnk2-homologous domain profile.	28	132	IPR002902	-
	Adu05g01336	675	SUPERFAMILY	Protein kinase-like (PK-like)	337	625	IPR011009	-
	Adu05g01336	675	ProSitePatterns	Protein kinases ATP-binding region signature.	361	383	IPR017441	GO:0005524
	Adu05g01336	675	ProSiteProfiles	Gnk2-homologous domain profile.	140	252	IPR002902	-
	Adu05g01336	675	ProSiteProfiles	Protein kinase domain profile.	355	641	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Adu05g01336	675	SMART	serkin_6	355	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu05g01336	Adu-Chr5	20018745	20021306	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu05g01336	30	643	Receptor kinase-like Gene Family	AT4G23230	41.548	6.27e-163	480

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Adu05g01336		PK_Tyr_Ser-Thr	2.2e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu05g01336	-		-	adu:107488598	1362.05