Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01335 ATGTATGGGCTCTACATGTGCCTTGACTTCATCTCAAGCAAAGCTTGCCAGAACTGCATAGCCACCGCAATAGAGGACATCCTCAAACTCTGTCCCCAATCACAAGAAGCTGTTCTTTGGGAGGAGAGCTGTCAGATGCGTTATTCCAATACCAACTTCATCGGCACGCTGAATGACACAGGGAACATAGGCAAAGACAATGTTCAAAATGTGTCAGAACCACACAAATTTCAGTCTTCTGTGAACCAGATGCTGAGTAATCTTTCGGCCACCGCAGCTTTTAATGTTTCGGCAAACATGTATGCCACCGGAGAAGCTCCCTTTGGAGATGAAACAATATATGCCTTAGTGCAGTGCACAAGAGATTTATCAGCCAATGATTGCAGCAAGTGCCTCAAAAGTGCTATGAAAGACATACCAAGCTGTTGCTATGGCTCCATCGGTGCCAGAGTCCTGAGCCGCAGTTGTTACCTCAGATATGAATTTTATCCCTTCTATCTTGGTGCCACAGGGCCCTTAAGTCCTTCACCCCGCACAAATCAAGGCAAAAATAGTTCAAGGTCGAGCAAATTTACACGGAACAAGAAAACACACAAGCGGGATGAAGCAGTGTTCCATCATCCAGATTTTCCACGATTACATGGCGTAATATCCGAGGACTCCCCTTATATTGATTTTGGATCACTTTGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAACTTGGACAAGGTGGCTTTGGTCCAGTTTACAAGGGGATTCTAAGCAATGAGCAGGAGGTAGCAATCAAGAGGCTCTCAACCTGTTCTGAACAGGGCTCAGAGGAATTCATAAACGAGGTTCTGCTCATAATGAAGCTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGGGGAAGAGAAGCTTCTTGTATATGAATATTTGCCCAACGGTAGCCTTGATGTACTCCTTTTCGATCCTAACGAACGTGCAAAGCTAGTTTGGACGAAACGCCTTGATATAATAGATGGATTAGCAAGGGGGATTCTTTATCTTCACGAAGACTCTCGACTTAAAATTATTCATAGAGACCTAAAAGCAAGCAATGTGTTGTTGGACTCAGATATGAATCCAAAGATCTCGGACTTTGGAATGGCAAAAATATTCGCAGGGAATGAAGGCGAAGCTAACACAGCTACAATAGTTGGCACATATGGATATATGGCACCGGAGTATGCTATGGAGGGACTATATTCCATAAAATCTGATGTTTTTGCATTTGGAGTACTAGTTCTGGAGATCATTACAGGGAAGCATAATGCAGACTTCTTCCACTCTAAAAGTACTCCTAGTCTTCTAACATATGCATGGCATCTATGGAATGAGGGGAAGGGACTAGAGTTAAAGGATCCCTTGTTAGGTGATTCATGCCAAGAAGATGAGTTCTTGAGATGCATGAATATTGGACTGCTGTGTGTTCAAGAAGATGCATATGATAGGCCAAGCATGTCTTCTGTTGTTCTAATATTGAAGAATGAATCAGCAATGGTTGGCCAACCAGCGCGACCACCTTTCTCAGTAGGGAAATTCAATGACAATGATGGGCTGCACCCACACTCCAAACAATGCTCTATCACTTTCTTAACTGATTCTGACATATTATTGCCTCGTAACTGA 1668 0.4269 MYGLYMCLDFISSKACQNCIATAIEDILKLCPQSQEAVLWEESCQMRYSNTNFIGTLNDTGNIGKDNVQNVSEPHKFQSSVNQMLSNLSATAAFNVSANMYATGEAPFGDETIYALVQCTRDLSANDCSKCLKSAMKDIPSCCYGSIGARVLSRSCYLRYEFYPFYLGATGPLSPSPRTNQGKNSSRSSKFTRNKKTHKRDEAVFHHPDFPRLHGVISEDSPYIDFGSLCVATKNFSDSNKLGQGGFGPVYKGILSNEQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKLLVYEYLPNGSLDVLLFDPNERAKLVWTKRLDIIDGLARGILYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMAKIFAGNEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFAFGVLVLEIITGKHNADFFHSKSTPSLLTYAWHLWNEGKGLELKDPLLGDSCQEDEFLRCMNIGLLCVQEDAYDRPSMSSVVLILKNESAMVGQPARPPFSVGKFNDNDGLHPHSKQCSITFLTDSDILLPRN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01335 555 CDD STKc_IRAK 242 509 - -
Adu05g01335 555 ProSiteProfiles Protein kinase domain profile. 236 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01335 555 Pfam Protein tyrosine and serine/threonine kinase 239 504 IPR001245 GO:0004672|GO:0006468
Adu05g01335 555 ProSiteProfiles Gnk2-homologous domain profile. 1 53 IPR002902 -
Adu05g01335 555 ProSiteProfiles Gnk2-homologous domain profile. 59 165 IPR002902 -
Adu05g01335 555 Gene3D - 63 165 IPR038408 -
Adu05g01335 555 Gene3D - 1 53 IPR038408 -
Adu05g01335 555 MobiDBLite consensus disorder prediction 174 188 - -
Adu05g01335 555 Pfam Salt stress response/antifungal 1 50 IPR002902 -
Adu05g01335 555 Pfam Salt stress response/antifungal 69 162 IPR002902 -
Adu05g01335 555 Gene3D Transferase(Phosphotransferase) domain 1 312 516 - -
Adu05g01335 555 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 6 549 - -
Adu05g01335 555 SUPERFAMILY Protein kinase-like (PK-like) 221 531 IPR011009 -
Adu05g01335 555 MobiDBLite consensus disorder prediction 174 199 - -
Adu05g01335 555 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 549 - -
Adu05g01335 555 Gene3D Phosphorylase Kinase; domain 1 203 311 - -
Adu05g01335 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Adu05g01335 555 SMART serkin_6 236 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01335 Adu-Chr5 20014222 20016601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01335 1 530 Receptor kinase-like Gene Family AT4G05200 43.772 3.13e-164 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Adu05g01335 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01335 - - ahf:112749922 1083.55