Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01317 ATGTTTCCCACGAACGTGTTCGATTCTCATCAGCAGCACATGATGCTTGATATGTCATCGTCTCACAATGAGAGTGATTTGGGAATAAGGACCGGAGATGATGAGTTCTTTGACATTAAATCTGCTACTGAGATCGTCATGGAAGCTCCTTCCGGTGATGATGAGCAAGATCCCAACCAACGACCCAAAAAGAAGGGTTACCATCGCCACACACAGCACCAGATACAAGAAATGGAAGCGTTCTTCAAGCAGTGTCCACACCCAGATGACAAGCAAAGAAAGGAGCTGAGCCGTGAGCTGGGATTAGAGCCATTGCAAGTAAAGTTTTGGTTCCAAAACAAGCGGACACAGATGAAGGCACAACATGAGCGACACGAGAACGCTATATTAAAGGCTGAGAACGAGAAGCTTCGTGCCGAGAACAGCAGATACAAGGAGGCCCTAAGCAATGCTACTTGCCCCAACTGTGGAGGACCTGCTGCCCTTGGTGAAATGTCCTTTGACGAGCAGCACCTCCGGATTGAGAATGCTCGTCTCAAACAAGAGATTGATAGGATTTCGGGAATAGCGGAGAAATATGTTGGGAAGCCAGTGACTTCCTCTCACAATAGCAATCACATGGCTCCACATTCTCGCTCGCTTGATCTTGGAGTTGGTAGCTATGGTGGAGGATCACAGTCCTCAGCCGGCGGCATGGTTGGAGAGATGTATGGCGGCAGTGAGCTTCTGAGGCCGTTCCCAGTTCCTTGTGATTCGGACAAACCCAGGATTGTGGAGCTTGCTGTGGCAGCTATGGAGGAACTAACAAGACTAGCTCAGGTTGGAGATCCTTTGTGGGTCCAAAGCAACCAGCACTGTACTGAGATTCTAAACGAAGATGAATACTTGAGGACCTTTAGAGTTATAGGCCCAAAAGCGTTGGGCTTGAGATCTGAATCCTCAAGAGAATCCGCGGTGATTATCATGAATCACACTAAACTGGTTGAGATACTAATGGATGTGAATCAATGGTCAACAATGTTCTGTGGTATTGTGTCAAGAGCGTTGACACTTGAAGTGCTTTCAACCGGAGTGGCAGGAAACTATAACGGAGCGTTGCAAGTGATGTCGGCTGAGTTCCAGGTGGCATCGCCTCTTGTTCCAAGCAGAGAGAACTATTTCGTAAGGTACTGCAAGGAACATCCGGATGGGAGATGGACAGTGGTAGATGTGTCGTTGGAGAATGAGAGCAGAAGCCGAAGAAGCAGCCGAAGAAGGCCCTCTGGCTGCTTAATTGAAGAACTCCCAAACGGCTACTCCAAGGTGACATGGATTGAGCATGTAGAAGTGGATGACAGAGGCGTGCATAGCCTCTACAAGCCATTGGTGAAGTGCGGGCTGGCCTTTGGAGCTAAGAGGTGGATGGCGACGTTAGAGAGACAATGCGAACGTGTTGCGAGTTACATAGGAGGAGGAGCAGGGGAGCTGTGTGGTACGAGTGCGGAGGGAAGGAGGAGCATGCTGAAGTTGGCAGAGAGAATGGTGATGAGCTTCTGCACTGGAGTGGGAGCTTCCACGGCACATGCATGGACCACTCTGTCGTCGGATATGGATGATGTGAGGGTTATGACGAGGAAGAGCATGGACGACCCTGGCAGACCCCCTGGCATTGTCCTCTGCGCTGCCACTTCCTTCTCCCTCCCTGTTCCTCCCAACACTCTCTTTCATTTCCTCAGAGATCAGAACTCCCGAAGCCAGTGGGATATCCTCTCCAACCGAGGCCTTGTTCAAGAAATCACACACATAGCAAGCTCTGCCAACGTGCTCTCTCTGCTTCGCGTCAATAGTGTGAATTCGAGCCAAAGCAACATGCTGATACTTCAGGAGAGTTGTACAGACTGCAGTGGATCCTATGTGGTATATGCACCCGTGGACATGGCTGCCATGAATATAATTCTTAGTGGCGGGGATCCAGATTACCTGGCCCTGCTTCCCTCGGGTTTTGCGATTCTTCCTGATGGCCTTGCTGCATCTTCTGGAGGGTCTCTCCTCACGGTTGCGTTTCAGATCTTGGTTGACTCCGCCCCAACCGCCAAGCTATCCCTGGGTTCAGTCGCCACTCTAGCTAATGTTAGAAGAATCAAGATAGCAGCTTTCAGAACAAGTCAATGA 2151 0.5007 MFPTNVFDSHQQHMMLDMSSSHNESDLGIRTGDDEFFDIKSATEIVMEAPSGDDEQDPNQRPKKKGYHRHTQHQIQEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENAILKAENEKLRAENSRYKEALSNATCPNCGGPAALGEMSFDEQHLRIENARLKQEIDRISGIAEKYVGKPVTSSHNSNHMAPHSRSLDLGVGSYGGGSQSSAGGMVGEMYGGSELLRPFPVPCDSDKPRIVELAVAAMEELTRLAQVGDPLWVQSNQHCTEILNEDEYLRTFRVIGPKALGLRSESSRESAVIIMNHTKLVEILMDVNQWSTMFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVASPLVPSRENYFVRYCKEHPDGRWTVVDVSLENESRSRRSSRRRPSGCLIEELPNGYSKVTWIEHVEVDDRGVHSLYKPLVKCGLAFGAKRWMATLERQCERVASYIGGGAGELCGTSAEGRRSMLKLAERMVMSFCTGVGASTAHAWTTLSSDMDDVRVMTRKSMDDPGRPPGIVLCAATSFSLPVPPNTLFHFLRDQNSRSQWDILSNRGLVQEITHIASSANVLSLLRVNSVNSSQSNMLILQESCTDCSGSYVVYAPVDMAAMNIILSGGDPDYLALLPSGFAILPDGLAASSGGSLLTVAFQILVDSAPTAKLSLGSVATLANVRRIKIAAFRTSQ 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01317 716 ProSiteProfiles START domain profile. 250 480 IPR002913 GO:0008289
Adu05g01317 716 SMART START_1 259 477 IPR002913 GO:0008289
Adu05g01317 716 Gene3D - 50 137 - -
Adu05g01317 716 Gene3D - 315 477 IPR023393 -
Adu05g01317 716 SUPERFAMILY Homeodomain-like 48 121 IPR009057 -
Adu05g01317 716 Coils Coil 115 150 - -
Adu05g01317 716 SUPERFAMILY Bet v1-like 495 700 - -
Adu05g01317 716 SUPERFAMILY Bet v1-like 251 479 - -
Adu05g01317 716 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 706 IPR042160 -
Adu05g01317 716 CDD START_ArGLABRA2_like 254 476 - -
Adu05g01317 716 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Adu05g01317 716 MobiDBLite consensus disorder prediction 49 72 - -
Adu05g01317 716 SMART HOX_1 63 125 IPR001356 GO:0003677
Adu05g01317 716 Pfam START domain 260 477 IPR002913 GO:0008289
Adu05g01317 716 CDD homeodomain 64 122 IPR001356 GO:0003677
Adu05g01317 716 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 18 706 - -
Adu05g01317 716 Pfam Homeodomain 64 119 IPR001356 GO:0003677
Adu05g01317 716 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01317 Adu-Chr5 19493865 19496645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01317 1 710 Homeobox Transcription Factor Family AT4G21750 69.382 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu05g01317 START 1.5e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01317 K09338 - gmx:100815499 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01317 05 19493865 19496645 Adu05g01317 05 19493865 19496645 ECH