Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01312 ATGAATGGCATCAAAAGAGATTTTCTAGTGATGGTTGGAACATATTTCAAACTTCCAAGACTTATAATCTCAAATGATGAACAACAACGCCAAAGTCCAAGAGCTCTTATTGAGGCATATGGTTGTGACAAAAGCCATGAAATTCCTAGTACTAAGCTTTTGTTGGTGGAGCAGCCTGGCAGAAATGGTTTAGGGAGCAAGTTTCCATTGGCATCATGGCAGGACACTGAAGAAGAGGAGTTTGATTGGAAAGATATGAATCCAGGATTAGTAGACTGTAATACAAACAGCAGTTCTATGCAATCAAGTGTTAGATTCTCCAAGAAAAGAAAGTTATCTAATGATCTATCTAATTCTTCACAGTACCCCTTTAATATGGGGGATGCTCTCCCTGCTGTCAATTCTCATGCTACTTGTCCTTCCGGCTTGAATCCATCATTTCCATTGCAGAAACATCCTAGGAGTCTGTTTGAACCAATAAACGTTAATAATAACACCAATGTGGGTCATGGTCCCAATAGAACTTTGTTTATACATGACCAGTTGCCTAATCAATCTGGACCAATTTCCTCTAACATGCAAAATCATGGACAAGCACCTCAACTACAGTTTCTTCCACCTAAAGTTCCATCTTCAACACAAATTAATCATGGGAGCTCTTTGCAAGGACATGGTGCCTCAATAAGTACGCCCATCTCAAATCCATTACCTGATATGCAGGGCCAAAGTTTACATTTACATGAGGGAACCTTGCCACCTTTACATCCAAGCCTCCCAACTGCTCCATCACAAATGATGTCTCATCCCCATGCCAATGCTTCAGTAACAAGTCAACCACCACCTGCATATCTTAATTTGATTAGTTCACTAGTGAACCACGATGTGATCTCGGTAACTAATCCTCCCACCAATCCACCCACTGGACTGGATTCCATTAGGACAGAGTTCGATCCAGATATCTTGAAGGTTCGTCATGAAGGTGTAATCAGTGCCTTATACGGTGATCTTCCTAGACAATGCATGAGTTGTGGTCTCCGATTCAAAAGGCAAGATGAGCACAGTAAATATATGGATTGGCACGTGACTAGGAACCGAATGTCGAAAAGCCGGAAACAGAAGGGGTCTCAAAAGTGGTTTGCAAGTGGGAGCATGTGGCTAAGTGGTGCAGAGGCTTCGGAAAAGGAATCGATTCCAGGGTCATTGCCTCCCGAGGATACAGAGGAAATGAAATATGAGGAAGAGTTAGGCGTTCCTGTAGAAGAGGATCAGAGTCGATGTGCACTGTGTGGAGAGGGCTTCGATGAGTTTTACAGCCACAAAATGGATGAGTGGATGTATAGAGGAGCCACATACCTTAAGGCACCATGGGAACAACATTGGCCCCCATAG 1389 0.4298 MNGIKRDFLVMVGTYFKLPRLIISNDEQQRQSPRALIEAYGCDKSHEIPSTKLLLVEQPGRNGLGSKFPLASWQDTEEEEFDWKDMNPGLVDCNTNSSSMQSSVRFSKKRKLSNDLSNSSQYPFNMGDALPAVNSHATCPSGLNPSFPLQKHPRSLFEPINVNNNTNVGHGPNRTLFIHDQLPNQSGPISSNMQNHGQAPQLQFLPPKVPSSTQINHGSSLQGHGASISTPISNPLPDMQGQSLHLHEGTLPPLHPSLPTAPSQMMSHPHANASVTSQPPPAYLNLISSLVNHDVISVTNPPTNPPTGLDSIRTEFDPDILKVRHEGVISALYGDLPRQCMSCGLRFKRQDEHSKYMDWHVTRNRMSKSRKQKGSQKWFASGSMWLSGAEASEKESIPGSLPPEDTEEMKYEEELGVPVEEDQSRCALCGEGFDEFYSHKMDEWMYRGATYLKAPWEQHWPP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01312 462 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 24 456 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Adu05g01312 462 MobiDBLite consensus disorder prediction 184 277 - -
Adu05g01312 462 MobiDBLite consensus disorder prediction 184 240 - -
Adu05g01312 462 MobiDBLite consensus disorder prediction 260 277 - -
Adu05g01312 462 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 24 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01312 Adu-Chr5 19416567 19418034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01312 239 457 C2H2 Transcription Factor Family AT4G04885 51.965 4.19e-66 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01312 K14400 - aip:107640327 523.087