Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01304 ATGCCAAACATGTCAACATGTATCTGCGTTAGGAGTGCAGGAAGTTGCCTTACTCTGGAGGTTATCAGTGGTCCTTCCCGGGGGATTCGATGTTCTGTACAGTCTATGAATTCTGCTGGTCTGCCCCTCACCCTGGGAAGAGTTCCTCCAAGCGATTTGGTGATAAAGGATTCAGAGGTTTCGGGAAAGCATGCCATGATAAATTGGAATTTGGATAAAATGAAATGGGAGTTGGTAGATATGGGTAGCTTAAATGGAACACTCTTGAATTCTAGGCCAATCAACCATCCAGACACTGGAAGCAGGCTTTGGGGAGATCCAGTGAATCTTGCTGATGGCGATATCATAACACTTGGAACAACATCGAACATAAGTGTTCATGTTGCTGCACAAAATCAGCAACGCATTCCATTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTAGAGGAGCAAAACAGCTTGCTATGGAAGATGTTTGCTATTATCAGTGGCCTCTGCCTGGGCTGGATCAGTTTGGGCTATTTGGTATCTGCGATGGACATGGTGGAGATGGGGCTGCTAAATCCGCAAGCAAACTTTTTCCTGAGATAATTGCTAATATATTATTGGATTCATCAAAAAGGGAGCGGATTTTATCACTTCATGATGCTTCAGAAATTCTAAGAGATGCATTTTCTCAAACAGAAGCATGCTTGAATCATTACTATGAGGGATGTACAGCAACAGTGCTTCTGGTGTGGGCTGATGGTGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCTGCCTGTGTTATGAGTGTAAATGGGGAACAAATCAAGATGTCGGAAGATCACAAGATAACAACTTATTCTGAAAGACAGAGAATTGAAGAGACTGGTGAACCATTGAAAGATGGAGAAACACGTTTATATGGGATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGCTCAGAGCCTTATATTAGTCAAGTTGTGCATATTGATCAAGCAAGCAGGGCTTTTGCCGTTCTAGCTAGTGACGGGCTTTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTAGTGCTTCAGATGAGGGAGAAATACTGTACAGAGAGAGAGAATTTAGCAGAAAAGATTGCTAGTTCATTGTTGGCTGAGGCTAAGACACTCAGAACAAAGGACAATACCTCTGTAATTTTCTTAGATTTTGATAGCTTCAATAGATTTTCTTGTAAAGTTGAATCCTAG 1269 0.4247 MPNMSTCICVRSAGSCLTLEVISGPSRGIRCSVQSMNSAGLPLTLGRVPPSDLVIKDSEVSGKHAMINWNLDKMKWELVDMGSLNGTLLNSRPINHPDTGSRLWGDPVNLADGDIITLGTTSNISVHVAAQNQQRIPFGVGMASDPMALRRGAKQLAMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIANILLDSSKRERILSLHDASEILRDAFSQTEACLNHYYEGCTATVLLVWADGENFFAQCANVGDSACVMSVNGEQIKMSEDHKITTYSERQRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHIDQASRAFAVLASDGLWDVISMKKAIQLVLQMREKYCTERENLAEKIASSLLAEAKTLRTKDNTSVIFLDFDSFNRFSCKVES 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01304 422 PANTHER PROTEIN PHOSPHATASE 2C 12 421 IPR015655 GO:0004722|GO:0006470
Adu05g01304 422 ProSiteProfiles Forkhead-associated (FHA) domain profile. 43 94 IPR000253 GO:0005515
Adu05g01304 422 SMART PP2C_4 133 408 IPR001932 -
Adu05g01304 422 ProSitePatterns PPM-type phosphatase domain signature. 176 184 IPR000222 GO:0043169
Adu05g01304 422 Gene3D - 148 418 IPR036457 -
Adu05g01304 422 Gene3D - 11 147 - -
Adu05g01304 422 ProSiteProfiles PPM-type phosphatase domain profile. 139 410 IPR001932 -
Adu05g01304 422 SUPERFAMILY PP2C-like 150 412 IPR036457 -
Adu05g01304 422 Pfam FHA domain 44 119 IPR000253 GO:0005515
Adu05g01304 422 PANTHER PROTEIN PHOSPHATASE 2C 70 12 421 - -
Adu05g01304 422 SUPERFAMILY SMAD/FHA domain 16 122 IPR008984 GO:0005515
Adu05g01304 422 Pfam Protein phosphatase 2C 157 403 IPR001932 -
Adu05g01304 422 CDD FHA 17 128 IPR000253 GO:0005515
Adu05g01304 422 SMART FHA_2 42 94 IPR000253 GO:0005515
Adu05g01304 422 CDD PP2Cc 151 410 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01304 Adu-Chr5 19190204 19193379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01304 10 412 PP2C-type Phosphatase Gene Family AT5G19280 63.462 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01304 K01090 - gmx:100170643 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01304 05 19190204 19193379 Adu05g01304 05 19190204 19193379 ECH