Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01292 ATGGAATGGTGGAAGTTGCAAAGAATAATAAGAGAGGACACAATAATAGTAGTAAGCAAACTGTTCATAGGAAATCCATTGAGACATTTGGTCAAAGAACGTTACAGTACAGAGGTGTCACAAGGCATAGATGGACCGGCAGATATGAAGCACATTTGTGGGATAATAGTTGCAAAAAAGAAGGGCAAACTAGAAAAGGAAGACAAGTTGGGTGGCTATCATATGGAAGAAAAAGCTGCAAGAGCTTATGATCTTACAACCCTTAAGTATTGGGGACATTCAATACACATAAACTTTCCGAACTTGTTATGTTGGTTGTGCAATTGGGAATGTGATAAGGATACTGTTAGAGAGGGCAAGCATATTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACTTTTATTCATGTGATTGATTTGTCTAGAAAGGAAACTCTTGTCCGCATCACTGATAGCATATTTAGAAAATTTGAAAGATTCTCTAGTAAGCTTTTCGCGTGGTTGCAATTGTTACGCTCGGTGAAGAGCATGGTGGTGGATACAGGGGAGGAGGCAATGGTGGTGGTGTTTGCTACAACTGCGGTGGGATGGGTCACATGGTCACGGAGGAGAAGACGGTTCATCTTTTCCTCTGCTGTTAACTGCTTTTTCTACGACCTCATAGAGACTAACATTTTGTCTTCCTGCATGTTGCTGGCGCAGTGGAGGTGGCGTGAGCTCATGGAAGGTGCAATGGAGCCGGCTTGCTGGATGGCTGAAAAACCAAAAAAGGTTGGAACTCAGCATTTGGGTCTTGGCTTCGACCATCTCATAACATCGAAGGAAGCCCTAGGTGCAGTGAGGAGGACCGTCGTTGCTGGTGTTGTTACTGCCGCTCCTGTCGGTGGCGCGCAGGATCCGCCCGTGGTCGAAGTGGTCCGAGGCGGTGAAGGTGCTGGCCCACTGTGCGAAGCCCCAATTTTGTCATGGTATGTGAGGAGTGGGGGACCAGCAACTCGTCATCCTAGTAAATAA 1020 0.4569 MEWWKLQRIIREDTIIVVSKLFIGNPLRHLVKERYSTEVSQGIDGPADMKHICGIIVAKKKGKLEKEDKLGGYHMEEKAARAYDLTTLKYWGHSIHINFPNLLCWLCNWECDKDTVREGKHIFGVAHIFASFNDTFIHVIDLSRKETLVRITDSIFRKFERFSSKLFAWLQLLRSVKSMVVDTGEEAMVVVFATTAVGWVTWSRRRRRFIFSSAVNCFFYDLIETNILSSCMLLAQWRWRELMEGAMEPACWMAEKPKKVGTQHLGLGFDHLITSKEALGAVRRTVVAGVVTAAPVGGAQDPPVVEVVRGGEGAGPLCEAPILSWYVRSGGPATRHPSK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01292 339 SUPERFAMILY DNA-binding domain 66 101 IPR016177 GO:0003677
Adu05g01292 339 Pfam Ribosomal protein S11 124 191 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu05g01292 339 ProSiteProfiles AP2/ERF domain profile. 21 100 IPR001471 GO:0003700|GO:0006355
Adu05g01292 339 Gene3D Ribosomal protein S11 113 212 IPR036967 GO:0003735|GO:0005840|GO:0006412
Adu05g01292 339 PANTHER 40S RIBOSOMAL PROTEIN S14-2 115 171 - -
Adu05g01292 339 SUPERFAMILY Translational machinery components 119 200 - -
Adu05g01292 339 Gene3D AP2/ERF domain 29 101 IPR036955 GO:0003700|GO:0006355
Adu05g01292 339 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 115 171 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01292 Adu-Chr5 18846870 18852181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01292 115 196 Cytoplasmic Ribosomal Protein Gene Family AT2G36160 48.780 7.96e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01292 K02955 - adu:107467859 132.109