Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01288 ATGTTGATGAGTAAGCACAAACCTTCATCCAAGATATGGGATGTTTTATCAAATGAAGAGGTTGTGGACATAGTGGCATCTTCTCCACGCCCTTCTGCGGCTCGATCACTGGTGGAGTCAGCTGTTAAAGTATGGAGGATGAAGTTCCCTTTGTGCAAGGTTGATGATTGTGCTGCAGTTTGCCTCTTCGTTGATTCAAATTTGGACTCGGCCTTGCTGGTTTTATTGAGAAGGGAGGACTCTTCTTCTGAATTGGGGATTGATACAATGAAGGTATCTCAGACAAAGCGACAACGTGATGCAAAGACAGTTCAAGAAGCATTTGCCACGAACAAAAAGTATTGTATCTTATGA 354 0.4294 MLMSKHKPSSKIWDVLSNEEVVDIVASSPRPSAARSLVESAVKVWRMKFPLCKVDDCAAVCLFVDSNLDSALLVLLRREDSSSELGIDTMKVSQTKRQRDAKTVQEAFATNKKYCIL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01288 117 PANTHER ALPHABET, ISOFORM E-RELATED 12 87 - -
Adu05g01288 117 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 12 87 - -
Adu05g01288 117 Gene3D - 9 71 IPR036457 -
Adu05g01288 117 SUPERFAMILY PP2C-like 11 65 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01288 Adu-Chr5 18659139 18661021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01288 12 107 PP2C-type Phosphatase Gene Family AT1G16220 42.268 4.57e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01288 - - gmx:100802479 92.8189