Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01281 ATGGCTAATGCTACTAAGAAATTTGAACCTGTGACGGAGTCTCCTTCTGCAGTAGCATCAAAAGTTGATGCAACTACCAAATTCGATTCTGCAACAGAGACTTCAACAGATCTGCTACAAGAAACTGAAGCATTCAAGATCTGGAAGCAAGATGATCTCTCCCTTACCACATGGCTCATGGCTTCAATGACTACATCATACAAGAACAAGATTGTTCATTGTGCCCGCTTCTGTGATGCGTGGACCACCATCATCACCTACTTTTCCTCAACATCCAAGACAAGAATTCAAAGTTTGAAATCCCAATTAAAATGTGTCAAGAAAATAAGTACAGTTCATGATTATTTCTCCAAAATTCAAAAGCTAGTTGACTCCCTTTCTGCTATTGGGTACCAATTGGATGATGATGATCATATCCATGCTATTACTGATGGATTGCCTGAGGATTATAGTGATTCAAGACTCCATCCTCATCAATTCCCGTGGAAAACTTCACACAAGCTTTCTTACCGTCATCAACTAGATGAATGGGTGCAAGACGAGGTCGTGGTGGCGGTAGATCCCAAAGGGGTGGTCGAAGCTCATGACAACCTCCAAGAACAAACTGCCAAATTTGTGGCAGGTCTCTCAGATTTCAACCTGAAAATGTTCGAGATCCGACCTAAAGAAGCCGTTGTGGTTAACTTCGTTTTCGAGTTGCATCTCATGCTGGCCTGCCCCGATTCCGTCAAAAAATTTCTTGCCACAGTTAAGAAGATCAAGTCGAAGATCTTCACGATGGTGGAGtga 789 0.4233 MANATKKFEPVTESPSAVASKVDATTKFDSATETSTDLLQETEAFKIWKQDDLSLTTWLMASMTTSYKNKIVHCARFCDAWTTIITYFSSTSKTRIQSLKSQLKCVKKISTVHDYFSKIQKLVDSLSAIGYQLDDDDHIHAITDGLPEDYSDSRLHPHQFPWKTSHKLSYRHQLDEWVQDEVVVAVDPKGVVEAHDNLQEQTAKFVAGLSDFNLKMFEIRPKEAVVVNFVFELHLMLACPDSVKKFLATVKKIKSKIFTMVE 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01281 262 PANTHER - 38 151 - -
Adu05g01281 262 PANTHER - 38 151 - -
Adu05g01281 262 Pfam GRAS domain family 207 262 IPR005202 -
Adu05g01281 262 Pfam gag-polypeptide of LTR copia-type 48 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01281 Adu-Chr5 18514589 18519612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01281 209 262 GRAS Transcription Factor Family AT1G66350 54.545 4.16e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu05g01281 Retrotran_gag_2 3.7e-13 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01281 - - aip:107645971 154.451