Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01266 ATGCAAGCTCATGCAGCACTTGAAGCATGGACACATTGCATGACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACCGGCATCTACTGTGCACCAGCACCAGATGACTCCACCATTTTTACAGTGGCTGGAATTGACCTTAAGAATGCAAACATATCTGGTTCATTACCTGAAGATCTTGGCCTCTTAACCGACCTAGACTTCTTCCATATAAACTCCAATAGATTCACCGGTCCACTCCCTGAGAATTTTACCAAACTTGCTTATCTTTATGAGCTTGATATCAGTTTTAACCAATTCTCAGGACCCTTCCCACAAGTTGTTCTTGCCATTCCTTCCCTGAGATACTTGGATATCAGGTTCAACAACTTTGCCGGCGACGTTCCTTCGAGCCTTTTCGACCTCAAACNNNNNNNNAAATTCCAGTTCTCCTTACCACAAAACTTTGGGAACTCACCAGTTTCTGTTATGATATTATCAAACAATGATATAAAGGGTAGTATTCCATCAAGTGTGGCCAAAATGAAGGATACCCTTAATGAGATTATAATATCGAATACGGGACTAACGGGTCCATTACCCCAAGAAATAGGGTACTTAGACAAAGTGACAGTGTTTGATGTGAGCTTCAACAGATTGGAGGGAGAACTACCTGGAACCATGCAAGGAATGAAGAGCTTGGAACAGTTAGTTTTAAAGCATAACAATTTCTCAGGTGTGGTTCCTACCAGCATTTGTATGTTGCCTAAGTTGAAGCACTTCGATTGTTCAAATAATTACTTCCATGGTCCATTCCCAAAATGTCCCTTCATTAAACGAAAGCACAATCCGGGAAAATTCATGGGTTTCTAG 876 0.4155 MQAHAALEAWTHCMTSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTIFTVAGIDLKNANISGSLPEDLGLLTDLDFFHINSNRFTGPLPENFTKLAYLYELDISFNQFSGPFPQVVLAIPSLRYLDIRFNNFAGDVPSSLFDLKXXXKFQFSLPQNFGNSPVSVMILSNNDIKGSIPSSVAKMKDTLNEIIISNTGLTGPLPQEIGYLDKVTVFDVSFNRLEGELPGTMQGMKSLEQLVLKHNNFSGVVPTSICMLPKLKHFDCSNNYFHGPFPKCPFIKRKHNPGKFMGF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01266 291 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 2 282 - -
Adu05g01266 291 Pfam Leucine rich repeat 211 268 IPR001611 GO:0005515
Adu05g01266 291 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 2 282 - -
Adu05g01266 291 Gene3D Ribonuclease Inhibitor 2 161 IPR032675 -
Adu05g01266 291 Gene3D Ribonuclease Inhibitor 162 282 IPR032675 -
Adu05g01266 291 SUPERFAMILY L domain-like 15 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01266 Adu-Chr5 18362310 18363185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01266 1 276 Leucine-rich Repeat extension Gene Families AT3G22800 58.657 6.65e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01266 - - ahf:112748057 576.63