Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01264 atgactggCGGCAGAAATCCATCATCCAGCAAAACCCTAATCTGCCCCCGATTTCTCAGAGCTTTTGACAAACGATGGCGTCAAGATTTTGGACCCAGGGTGCGAGCGATTCTGAGGAAGAAAGCAGTGACTTTGATGAGTGATGACTCGGATAGCCAACGGCGGGTTGTCCGGTCGGCAAAGGATAAGCGATTCGAGGAGATGGCTTCTACCGTTGATCAGATGAAGAATGCCATGAAGATCAATGATTGGGTGAGCTTGCAGGAGAGCTTTGATAAGATCAACAAGCAGCTTGAGAAGGTCATGCGTGTTACCGAGTCTGAGAAGGTCCCCAGTCTCTACATCAAGGCCCTGGTGATGTTGGAAGACTTTTTGGCTCAGGCTTTGGCCAATAAGGATGCCAAAAAGAAGATGAGTAGTAGCAATGCTAAGGCTTTGAACTCGATGAAGCAGAAGTTGAAGAAGAACAATAAGCAATATGAGGAACTGATTAACAAATGCAGGGAGAGCCCTGAGAGTGAGGAGGAGAAAGAAGAGGAGGAATCCGAGGATGAGTATGAGAGTGATGGTGAGATTATCGAGCCGGATCAGCTTAAGGGAAGAGATGACCTGAAATCAGATTCTGAAGTCTCTCACTATGAAGATGAAAAGGTCGATGCTGGTGAGGGACCCTGGGACCAAAAACTTAGCAAGAGAGACAGACTTATGGATAGGCAATTCATGAAAGACCCTAGTGAGATCACTTGGGACACCGTCAACAAGAAATTCAAGGAGATTGTGGCAGCAAGGGGCAGGAAGGGAACTGGAAGGTTTGAGCAGGTTGAGCAGCTTACTTTCCTTACAAAAGTTGCTAAAACACCTGCACAGAAGTTGGAGATCCTTTTTAGTGTGGTATCTGCCCAGTTTGATGTTAACCCTGGCCTAAGTGGGCACATGCCCATTAATGTTTGGAAAAAATGTGTGCATAACTTGCTGGTCATTCTTGACATTTTAGTGCAATACCCTAACATAGTTGTTGATGATGCTGTGGAGCCAGATGAGAATGAAACACAGAAGGGCCCTGACCATAATGGACCAATTCGCATTTGGGGAAACTTGGTCACCTTCTTGGAAAGAATAGATGCCGAGTTTTTCAAGAGTTTGCAGTGCATAGATCCACATACTCGTGAGTATGTTGAGAGACTCAGGGATGAGCCAATGTTTCTTGTTCTTGCTCAGAATGTCCAGGAATACCTTGAAAGGGTTGGAGATTTCAAAGCTGCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCGTTTACTACAAACCACAGGAGGTTTATGTTGCAATGAAAAAATTGGCGGAGTTGGCTGAAGATGGGGTTAATGAAGGGGCTGGTGAGGAGAAAGGGTTTGAGGATACAAGAATTCCCACTCCATTTATTGCTACTCCTGAGCTTGTGCCCCGCAAACCTACCTTCCCTGAGAACAGCAGGACTCTAATGGACATATTGGTTACCCTGATATACAAGTATGGTGATGAGCGCACTAAAGCACGGGCAATGCTTTGTGACATATACCACCATGCTCTTCTTGACGAGTTCTCAATATCCCGTGATCTGCTGCTCATGAGCCACTTGCAAGACAGCGTTCAGCATATGGACATATCAACACAGATACTGTTTAACAGGGCTATGGCACAGTTGGGTCTATGTGCTTTTAGGGTTGGGTTGATTTCCGAAGCACATGGCTGTTTATCTGAACTTTATTCTGGTGGAAGGGTGAAGGAGTTGCTTGCACAAGGTGTGTCACAGAGTCGTTATCATGAAAAGACCCCAGAACAGGAAAGGTTGGAAAGAAGGCGTCAGATGCCATATCATATGCACATAAATCTTGAGCTCCTGGAGGCAGTGCATCTTACAACCGCTATGCTTCTTGAAGTTCCCAATATAGCAGCCAATGTTCATGATGCAAAGCGCAAAGTCATTAGTAAGAACTTCCGCCGCTTACTTGAGGTGAGTGACAAGCAAACGTTTACTGGTCCACCTGAAAATGTCAGAGACCATGTTATGGCTGCCACAAGGGCTCTTGCCAAAGGAGACTTCAACAAGGCTTATGACATCATTGTGTCTCTTGACGTTTGGAAGTTTGTTAGAAACAGAGATACTGTACTTGCAATGCTGAAAGATAAGATCAAGGAGGAGGCATTGAGGACATATCTCTTTACGTTCTCATCATCTTATGATTCTTTGAGCCTTGATCAACTCACCAAAATTTTTGATCTCTCTGTTGCTCATACTCATAACATTGTTAGTAGGATGATGATCAATGAAGAGCTTCATGCAAGCTGGGACCAGCCAACTGGCTGCATTGTTTTCCAGGATGTGGAGCACTCTAGGTTGCAGGCATTGGCATTCCAGTTAACAGAGAAGTTATCCATCCTTGCCGAGAGTAATGAAAGAGCAATGGAGGCAACCATAGGTGGTGGTGGATTGGATCTTCCTATGAGGCGTAGGGATGGCCAGGATTATGCTGCTGCTGCTGCTGGTGGAACCAACACTGGGAGTGGCAGGTGGCAGGACTTGGGTTCTCAGACAAGACAAGGTGGTGGGCGATATGGTAGTGGAGGTGGAAGGCCGTTGGCTTTAGGCCAAGCAGGTGGGGTTGGATATTCAAGGGACCGAGCAGGACGTGGATCTGGTCGGTATCAAGATTCTGCGTATGGAGGTTCAGGCAGGACTCAAGGTGGTATCTCATTGAGGGGATCGCATGGTGATGTATCATCGCGCATGGTTAGCCTCAAGGGTGTGCGTGCTTAG 2796 0.4632 MTGGRNPSSSKTLICPRFLRAFDKRWRQDFGPRVRAILRKKAVTLMSDDSDSQRRVVRSAKDKRFEEMASTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPSLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEELINKCRESPESEEEKEEEESEDEYESDGEIIEPDQLKGRDDLKSDSEVSHYEDEKVDAGEGPWDQKLSKRDRLMDRQFMKDPSEITWDTVNKKFKEIVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVHNLLVILDILVQYPNIVVDDAVEPDENETQKGPDHNGPIRIWGNLVTFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFLVLAQNVQEYLERVGDFKAASKVALRRVELVYYKPQEVYVAMKKLAELAEDGVNEGAGEEKGFEDTRIPTPFIATPELVPRKPTFPENSRTLMDILVTLIYKYGDERTKARAMLCDIYHHALLDEFSISRDLLLMSHLQDSVQHMDISTQILFNRAMAQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLTTAMLLEVPNIAANVHDAKRKVISKNFRRLLEVSDKQTFTGPPENVRDHVMAATRALAKGDFNKAYDIIVSLDVWKFVRNRDTVLAMLKDKIKEEALRTYLFTFSSSYDSLSLDQLTKIFDLSVAHTHNIVSRMMINEELHASWDQPTGCIVFQDVEHSRLQALAFQLTEKLSILAESNERAMEATIGGGGLDLPMRRRDGQDYAAAAAGGTNTGSGRWQDLGSQTRQGGGRYGSGGGRPLALGQAGGVGYSRDRAGRGSGRYQDSAYGGSGRTQGGISLRGSHGDVSSRMVSLKGVRA 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01264 931 MobiDBLite consensus disorder prediction 174 191 - -
Adu05g01264 931 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 22 862 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Adu05g01264 931 SUPERFAMILY "Winged helix" DNA-binding domain 714 789 IPR036390 -
Adu05g01264 931 Gene3D - 726 794 IPR036388 -
Adu05g01264 931 SMART PINT_4 719 807 IPR000717 -
Adu05g01264 931 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 47 930 - -
Adu05g01264 931 MobiDBLite consensus disorder prediction 839 931 - -
Adu05g01264 931 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 43 650 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Adu05g01264 931 Coils Coil 143 170 - -
Adu05g01264 931 ProSiteProfiles PCI domain profile. 618 790 IPR000717 -
Adu05g01264 931 Pfam PCI domain 658 786 IPR000717 -
Adu05g01264 931 MobiDBLite consensus disorder prediction 845 863 - -
Adu05g01264 931 MobiDBLite consensus disorder prediction 134 153 - -
Adu05g01264 931 MobiDBLite consensus disorder prediction 154 173 - -
Adu05g01264 931 MobiDBLite consensus disorder prediction 133 230 - -
Adu05g01264 931 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 47 930 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Adu05g01264 931 MobiDBLite consensus disorder prediction 192 230 - -
Adu05g01264 931 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 719 807 - -
Adu05g01264 931 MobiDBLite consensus disorder prediction 899 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01264 Adu-Chr5 18289516 18294096 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01264 48 931 Eukaryotic Initiation Factors Gene Family AT3G56150 69.000 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01264 K03252 - gmx:100781967 1434.08