Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01254 ATGGATTCGGATGGTGAGAATGGGAGGAGGAAACCAGAATGTGAAGCGGTAGGAGCTCTGAATTCAAAGATGAAGGGTACTGGAAACCAGAGCAGCAAAGACATGATCTTCAGAGCTGATAAAATTGATCTCAAGAGTTTGGATGCCCAGTTAGAAAAGCACCTGAGCAAGGTTTGGTCGAGAACGATGAGCCTCGACGTTAAAAGGCCAAAGGAGGAGTGGGAGATTGATTTGGCCAAATTGGATTTAAGGTATGCAGTTGCTCATGGCGCTTATGGAACTGTTTACAGGGGCACTTATGATTCACAAGATGTTGCAGTGAAAGTTTTGGACTGGGGTGAGGATGGTGTAGCTACTGCTGCTGAAACTGCCGCTTTACGTGCATCTTTTAGGCAGGAAGTCGCTGTTTGGCACAAACTTGACCATCCAAATGTCACCAAATTTGTCGGAGCTTCAATGGGTACTTCAAATCTTAAGATTCCCCCGAAAAACCCTTCAAGTTTTGATAACAATCCTCCTCCCCCTTCAAGGGCATGTTGTGTCATTGTTGAGTTTCTCCCTGGCGGAACGCTAAAACAATACTTGATAAAGAATAGGAGGAGGAAACTTGCTTATAAGATTGTGGTACAGCTGGCTTTAGACCTTGCCAGGGGTCTTAGCTATCTACACTCAATGAGGATTGTTCATCGAGATGTTAAAACAGAGAACATGTTGCTAGATACCAGCCGGAAACTGAAAATAGCTGATTTTGGAGTTGCTCGTGTTGAAGCTTTGAATCCAAGTGACATGACGGGTGAAACCGGAACACTTGGATATATGGCGCCCGAGGTCCTGGATGGTAAACCTTACAACAGGAGATGTGATGTGTATAGCTTCGGCATCTGCTTGTGGGAAATTTATTGCTGCGACATGCCTTATCCAAATCTAAGCTTCGCTGATATATCGTCTGCAGTTGTTCGTCAGAATTTACGACCAGATATTCCGAGATGTTGTCCAAGTGGCATGGCAAATATCATGAAAAGATGCTGGGATGCGAATCCAAACAAACGGCCGGAAATGAAGGACGTGGTGACAATGCTAGAAGCACTGGATACAAGCAGAGGTGGGGGAATGATACCTGAAGATGAGAGTCCAGGTTGCTTCTGTTTTGCACCAGCCAGAGGTCCCTAA 1170 0.453 MDSDGENGRRKPECEAVGALNSKMKGTGNQSSKDMIFRADKIDLKSLDAQLEKHLSKVWSRTMSLDVKRPKEEWEIDLAKLDLRYAVAHGAYGTVYRGTYDSQDVAVKVLDWGEDGVATAAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPPKNPSSFDNNPPPPSRACCVIVEFLPGGTLKQYLIKNRRRKLAYKIVVQLALDLARGLSYLHSMRIVHRDVKTENMLLDTSRKLKIADFGVARVEALNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPNLSFADISSAVVRQNLRPDIPRCCPSGMANIMKRCWDANPNKRPEMKDVVTMLEALDTSRGGGMIPEDESPGCFCFAPARGP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01254 389 PRINTS Tyrosine kinase catalytic domain signature 183 196 IPR001245 GO:0004672|GO:0006468
Adu05g01254 389 PRINTS Tyrosine kinase catalytic domain signature 221 239 IPR001245 GO:0004672|GO:0006468
Adu05g01254 389 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Adu05g01254 389 PRINTS Tyrosine kinase catalytic domain signature 331 353 IPR001245 GO:0004672|GO:0006468
Adu05g01254 389 SUPERFAMILY Protein kinase-like (PK-like) 62 360 IPR011009 -
Adu05g01254 389 Gene3D Phosphorylase Kinase; domain 1 70 161 - -
Adu05g01254 389 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 10 383 - -
Adu05g01254 389 ProSiteProfiles Protein kinase domain profile. 81 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01254 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Adu05g01254 389 Pfam Protein tyrosine and serine/threonine kinase 84 360 IPR001245 GO:0004672|GO:0006468
Adu05g01254 389 CDD STKc_MAP3K-like 87 360 - -
Adu05g01254 389 Gene3D Transferase(Phosphotransferase) domain 1 186 369 - -
Adu05g01254 389 SMART serkin_6 81 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01254 389 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 383 - -
Adu05g01254 389 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01254 Adu-Chr5 18164810 18167762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01254 28 389 MAP Kinase Kinase Kinase AT3G22750 79.282 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Adu05g01254 PK_Tyr_Ser-Thr 1.4e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01254 - - gmx:100803917 669.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02472 09 112202591 112204944 Adu05g01254 05 18164810 18167762 PCT