Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01246 ATGTTCTCTTCCTCCAACCCTTCTTCTTCCTCTTCTTCTTACCCTCCTCTTCTTCATCCCTTCTATGTTGATGATTCTCACAATGATAGCAATGCTTTTGTTGTTGCTAATAGTGATGGAAGTATGTTTGACCCATCTTCATCTCTTGGTACTACTACTCATCAAGCTCCATTACTGTTCCCAGCAGCAACAAATCTGAATGTTGCTGACTATGCTGCCATGCTCCAAAGGGACTGTTCTTATTATGATTATGGTGGTGGTGCTAGTGCTGGTGGTGTTGTGGGTGGTCATAATGGTCTGAACTTGTTGACAAAGAAAGGGAAGAAAGACAGGCACAGCAAGATTTTTACATCTCAGGGTTTGAGAGACAGAAGGGTGAGGCTTTCAAGCGAGATTGCTAGAAAGTTCTTTGATCTTCAGGACATGCTTGAGTATGACAAACCCAGCAACACCCTCCAATGGCTCTTCACTAAATCTGAGAATGCTATCAGAGAGCTTCAAAGAACCAAGCAAGCTAATCCCACCACCTGTTCTCATCATGATCATCACACCTTCTGCTTCACCTGCTTCTCATCATCAAAGGACAAGAGATTCCCTCCTCCAGATTCATCAGATCCTCATCATCATCATCATCAACTTATGGATGTTGAGCTTCAAGACCCTAATCTACTAAGAACCAATTTCATGAGCCTTGAGATCCCTCAACATCAGGAAGCTAGTTTCAACAACATTAATAACAATAACAACCACTCCCCTCCCAATTGGAATTTATACCAATGA 780 0.4231 MFSSSNPSSSSSSYPPLLHPFYVDDSHNDSNAFVVANSDGSMFDPSSSLGTTTHQAPLLFPAATNLNVADYAAMLQRDCSYYDYGGGASAGGVVGGHNGLNLLTKKGKKDRHSKIFTSQGLRDRRVRLSSEIARKFFDLQDMLEYDKPSNTLQWLFTKSENAIRELQRTKQANPTTCSHHDHHTFCFTCFSSSKDKRFPPPDSSDPHHHHHQLMDVELQDPNLLRTNFMSLEIPQHQEASFNNINNNNNHSPPNWNLYQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01246 259 PANTHER TRANSCRIPTION FACTOR TCP12 105 180 - -
Adu05g01246 259 ProSiteProfiles TCP domain profile. 108 166 IPR017887 -
Adu05g01246 259 Pfam TCP family transcription factor 107 207 IPR017887 -
Adu05g01246 259 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 105 180 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01246 Adu-Chr5 18052828 18053607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01246 103 173 TCP Transcription Factor Family AT1G67260 63.380 3.70e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu05g01246 TCP 3.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01246 - - aip:107640299 412.92