Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01245 ATGAGTACTGTTGGATACAGGTCAGATGATGAATGCTCTTATGTTGGAGGAAAGGGAGAAATCGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTTTGTAGTTACGCTGCTATTGATGATGGCGATCCGGTTATCATATCCATCCCATTTGCATTTGTGGATGGGAAGCCTCAATCAGTGTTTGTTGGAGATACTGCTGTGGATTTAATAACCATCAATAATACCACCAAAGAGCCTGTGCAGTTGTGGACTGTTCATATTTTTGCCTCAAATCCTCAGAACACTTTCACTCTTTCTCTGATGGAACCTCCATCAGCAAATTCAAATTCAAATGGAGATTCAGATGAGGGCTTTCTCGAATCATTTGATTTGGAGGATAGAATGCTTCAGCCTGGTGAGATTTTAAAAGTATGGTTGTCTTGCAAGACAAAAGAAATGGGCATGTACCAATCAATTGTGCATTTTGATGTTGGAGAAGAAAGAATAGAAAGGGTGGTTTTTGTCTTAGTTGAAGACAAGATTTCGAAATCGTTGGCTTCTAAGAGGCCTTATTCTCGACAAAGAAGAAAAGACAAATTTGCAGTAGATAATTTCGTCGCAGGCTCACGTCCTGCAGGGAAAACAAATCGGGCCTACATTAATAGGCTTCCAAAATATGATATTCCCGGGGATATTAGACACTTGCTTGAGAGCAATCAGATCCCTGAAGCTGTTGAAGGTGGTCTAACAAGAAAGAATTATGCTTCTTTTTTCAAAACATTGGTGATAATGGAAGAAATACAATTAGAGGAAGACATGAAGACTTATGACATGGAATGCGTAACAATGAGGAAGAGACCCAATCAATTTTTGTCCATGTTGGTTCCTGGGCTTGCTGAGAGAAGACCATCACTGGTTCATGGGGATTTCATCTTTGCCAAACTAGCATCTGAAAATGATAAGAACACTGGACGCCCTTATCAGGGATTTATCCATCGTGTTGAAGCTGATGAGATCTTTTTGAAGTTTGATAATGAATTTCACCTGCGCCATAGAGATGGAAATCTTTATGATGTTCACTTCACCTACAATAGGATCAATATGAGAAGGTTGTATCAAGCAGTTGAGGCAGCCAGTGGCTTAGGATCCGAGTTCCTTTTTCCATCTACTTTAGCCAGGAAGAGGTTCATTGAAACCACTGATCTGATTCCCATATCTGGTGCTTTTAATGATGAGCAGATTTCTTCAATCAAAAGTATTGTTGGTTGCAAAGGGGCGCCACCATATCTGATTTATGGGCCTCCAGGTACGGGAAAGACTAAGACAATAGTAGAAGCAGTTCTCCAGCTCTACAAACATAATAAGGATGCCCGTATTCTTGTCTGTGCACCATCAAATAGTGCAGCAGACCACATATTAGAGAAACTGCTTGCTGAGAAGTCTGTTGAATTTCAAGAAAATGAAATATTCAGGCTCAATGCTTCTACCAGGCCATATGAGGATGTCAAACCTGAAATTATCCGTTTCTGCTTCTTTGATGAGTTGATATTTAAATGCCCGCCAGTCAGTGCCCTCAGGCATTATAGGATTATAATATCAACATATATGAGTGCCTGTCTTCTTTATGCAGAAGATGTTTCACGGGGTCATTTCTCTCACATTTTCTTGGATGAGGCTGGCCAAGCCTCAGAACCTGAAACCATGATCCCTATATCCCATCTCTGCAGAAGGGAAACTGTTGTTGTTCTAGCTGGAGACCCAATGCAGTTGGGTCCAGTAATTTATTCGAAGAAAGCAGATACACATGGATTGGGGACATCATACCTGGCACGACTGTTTCAATGTGAGATGTATGCAACTGGAGATGCAAATTATGCAACGACATTGGTTAATAATTATCGATGCCATCCAGAGATATTACATCTCCCTTCAAAGCTGTTTTATAATGGGGCGTTGATTGCATGCAGAGACAAGACAACCTTCATGGTGAGTCCTGGCTTCCTCCCTAATGAGGAGTTTCCCGTTCTTTTCTTTGGCATCCAAGGATGTGATGAAAGAGAAGGGAATAACCCCTCATGGTTCAACCGAATTGAAGTGAGCAAAGTTGTCGAAGTTGTCAAGAGGCTGACAGCTGGTGGGAATATAATGGAGGAACACATTGGCATAATAGCACCATATAGGCAACAAGTACTCAAAATTAAACAGACTCTTGAAAATCAAGAGATGCCTGATATCAAAGTTGGTAGTGTTGAACAGTTTCAAGGACAAGAGAAGGAAGTTATTATCATATCAACTGTTCGATCAACCATCAAACACAATGAGTTTGACAGAGTCCACTGTCTTGGCTTTTTGAGCAATCATAGAAGGTTTAATGTGGCTGTAACTCGTGCCATATCATTGTTGGTTATCATCGGGAATCCACACATTATCTGCAAGGACAATTATTGGAGCCAAATGCTGTGGCACTGCGTAGACAATAAATCTTATCAGGGTTGTAAACTTCCTGATAGGCCAAAGACTTATGTTGAGGACGCTGGAGACAACAATGTGAAGCCTTATGGAGAGGTCAATGGAGAGGACTCTGTAGAATGGGGTCAAGATTTATCCCAGGTGGAGATTCCCAAACCTGTTACTGATGAGGCTGAATGGTCTGATGGCTGGAGAAGTAGTTGA 2652 0.4118 MSTVGYRSDDECSYVGGKGEIGFLDFEEEKSVCSYAAIDDGDPVIISIPFAFVDGKPQSVFVGDTAVDLITINNTTKEPVQLWTVHIFASNPQNTFTLSLMEPPSANSNSNGDSDEGFLESFDLEDRMLQPGEILKVWLSCKTKEMGMYQSIVHFDVGEERIERVVFVLVEDKISKSLASKRPYSRQRRKDKFAVDNFVAGSRPAGKTNRAYINRLPKYDIPGDIRHLLESNQIPEAVEGGLTRKNYASFFKTLVIMEEIQLEEDMKTYDMECVTMRKRPNQFLSMLVPGLAERRPSLVHGDFIFAKLASENDKNTGRPYQGFIHRVEADEIFLKFDNEFHLRHRDGNLYDVHFTYNRINMRRLYQAVEAASGLGSEFLFPSTLARKRFIETTDLIPISGAFNDEQISSIKSIVGCKGAPPYLIYGPPGTGKTKTIVEAVLQLYKHNKDARILVCAPSNSAADHILEKLLAEKSVEFQENEIFRLNASTRPYEDVKPEIIRFCFFDELIFKCPPVSALRHYRIIISTYMSACLLYAEDVSRGHFSHIFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVIYSKKADTHGLGTSYLARLFQCEMYATGDANYATTLVNNYRCHPEILHLPSKLFYNGALIACRDKTTFMVSPGFLPNEEFPVLFFGIQGCDEREGNNPSWFNRIEVSKVVEVVKRLTAGGNIMEEHIGIIAPYRQQVLKIKQTLENQEMPDIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDRVHCLGFLSNHRRFNVAVTRAISLLVIIGNPHIICKDNYWSQMLWHCVDNKSYQGCKLPDRPKTYVEDAGDNNVKPYGEVNGEDSVEWGQDLSQVEIPKPVTDEAEWSDGWRSS 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01245 883 Pfam AAA domain 599 800 IPR041679 -
Adu05g01245 883 CDD DEXXQc_Helz-like 403 627 - -
Adu05g01245 883 CDD SF1_C_Upf1 628 816 IPR041679 -
Adu05g01245 883 PANTHER RNA HELICASE SDE3-RELATED 8 837 - -
Adu05g01245 883 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 812 IPR027417 -
Adu05g01245 883 Gene3D - 627 828 IPR027417 -
Adu05g01245 883 Pfam AAA domain 517 590 IPR041677 GO:0004386
Adu05g01245 883 Pfam AAA domain 402 497 IPR041677 GO:0004386
Adu05g01245 883 Gene3D - 331 613 IPR027417 -
Adu05g01245 883 PANTHER DNA2/NAM7 HELICASE FAMILY 8 837 IPR045055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01245 Adu-Chr5 18021066 18025650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01245 401 558 Core DNA Replication Machinery Family AT1G08840 29.630 3.65e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01245 K18422 - gmx:100801796 1395.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01245 05 18021066 18025650 Adu05g01245 05 18021066 18025650 ECH