Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01237 ATGAATTTACTGAGGGAGCATTTTTTTCTAGAATCTGATCAGTCAGAAGATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGAAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAGAGCAAGACCTTCAAGAATAGTACTGGTGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTTAGGATGGAGAAATATTACACGATGGAAAAAAAGGAAGAAGGAGCCTAGATTAGAAACAAGAACTGGATGTGATGTCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGATGGCATACCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTTTTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATACTAAAGTCAGGGATTAGCACTTTACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCGCGAGTGTTGAAGAAGTTGGAGGATATGCGATTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAGAGAGCTACTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGATAATACCGATGATTGCATAAAGTACACCGTGTGTAAGCATGGGAGGCCCAATTTTATGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGTATTCCCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGACATCTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCATTCAATGATCCAAGTGGGTTCACCAGGGATGCTGTTGTTATTAGTTGTCAAAGTGCCTTGGTGGAATTTTCTAAACAATTTGCTGCAGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACCTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGCACTAATCAACCTCAATCAGGTGTAGCTAAAAGTAGCAATCTGTATGTGAATCAAAGCGGTGTAGGCTCAAGACAACCATCTAGGAAGAAGCGCCAACGTTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATTGAAGACGAGGCTAATGGTTCGGATGATGGCGACGTATATCCAAAACCGACAGCTGAGTTAGATAGTGATAACTAG 1488 0.4019 MNLLREHFFLESDQSEDILEAAYAVDSVQDITTLKFSENFAEKIGKYHFSTLQLAFDFYMKYSKSKGFSARRARPSRIVLVRFTNKSLYVIGKDLGWRNITRWKKRKKEPRLETRTGCDVRMDVKFVPESGRWHTFYFSDEHNHDLLDTQFSFMLPAHRKMSEADIMQMMNILKSGISTLQIFGLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRELLERYAAELYTHEIFLFFRPFLSRAGSMRVLNIDNTDDCIKYTVCKHGRPNFMWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKVLVDRDICEIPRSLVLDRWTKKVKSAFNDPSGFTRDAVVISCQSALVEFSKQFAAVAAKVPERYEETRDLIMGLYSSYKAADEGTNQPQSGVAKSSNLYVNQSGVGSRQPSRKKRQRCSVCQMEGHKKTTCPWQKDIDNNVIEDEANGSDDGDVYPKPTAELDSDN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01237 495 PANTHER OS03G0181600 PROTEIN 39 240 - -
Adu05g01237 495 PANTHER OS03G0181600 PROTEIN 249 398 - -
Adu05g01237 495 MobiDBLite consensus disorder prediction 465 495 - -
Adu05g01237 495 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 249 398 IPR031052 GO:0006355
Adu05g01237 495 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 240 IPR031052 GO:0006355
Adu05g01237 495 Pfam FAR1 DNA-binding domain 57 147 IPR004330 -
Adu05g01237 495 Pfam SWIM zinc finger 312 331 IPR007527 GO:0008270
Adu05g01237 495 ProSiteProfiles Zinc finger SWIM-type profile. 297 335 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01237 Adu-Chr5 17968127 17970349 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01237 FAR1 1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01237 - - adu:107488431 499.204