Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01233 ATGCACCCCACGTGTTTGATTTTTGGTCTGGAAGCCTTAAATAGCACTGGTGGAGGCGGTGGAGTTGGAGTTGGTGTTGGTGGTGGTGGTGGTGGTGGTTGTAGTGGTGGTGGGGCAGGGATGATGAGTAGTACTAGCAGGTCGCCATTCACAGTGTCTCAGTGGCAGGAACTGGAGCACCAAGCTCTGATTTACAAGTACATGGTGGCTGGTCTTCCTGTTCCTCCTGATCTTGTTATCCCCATTCAGAAGAGCTTTGACTCTATTTCCCATTCCTTCTTCCACCACCCTGCTCTGAGTTATTGTTCTTTCTATGGGAAGAAGGTGGACCCGGAGCCAGGACGATGCAGGAGAACTGATGGGAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCGGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAATCTATGACACAGTCATCATCCACTGTGACATCACTGACTGCTACAACTGGTGGCAGCAGTGGAACTGGAAGTTACCAGAACCTTAACACAATTACCTTTGCTAATCCTCAAGGCACTGGTTCTGGAGCTGAACAGACACATTATCATTTGGATTCTATCCCCTATGGGATTCCAAGCAGAGAGTACAGGTATCTTCAGGGAAATAAATCAGAGGGTGGCGAACAGAGTTTCTTTTCCAAAGCTTTAGGAAGCAACAAGGAACTTCGGATCGAAACGCAGCTGGAAAACACTTTGATGCCAACCAGAGTTGCCTCCTTCTCAACATCAAGATCAAACAACAACTCCATTTTGCCGGGTGATTATCTGCAGAATTCATATTTATCCGACGAGCATGCATCGGGTGAATCTGTGAAGCATGAGGGTCAGTCTCTTCGACCTTTCTTTGATGAATGGCCTAGGAGCAGGGATTCATGGTCTGGTCTGGAAGCAACTCAGCTGTCCATGTCCATTCCTATGTCGGCGTCGAACTTCTCTACAGCCAGCTCTCAATCCTCGCATGGCGAGACTAAATAA 1038 0.4855 MHPTCLIFGLEALNSTGGGGGVGVGVGGGGGGGCSGGGAGMMSSTSRSPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQKSFDSISHSFFHHPALSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQSMTQSSSTVTSLTATTGGSSGTGSYQNLNTITFANPQGTGSGAEQTHYHLDSIPYGIPSREYRYLQGNKSEGGEQSFFSKALGSNKELRIETQLENTLMPTRVASFSTSRSNNNSILPGDYLQNSYLSDEHASGESVKHEGQSLRPFFDEWPRSRDSWSGLEATQLSMSIPMSASNFSTASSQSSHGETK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01233 345 MobiDBLite consensus disorder prediction 137 178 - -
Adu05g01233 345 PANTHER GROWTH-REGULATING FACTOR 5 46 336 - -
Adu05g01233 345 ProSiteProfiles WRC domain profile. 110 154 IPR014977 -
Adu05g01233 345 Pfam QLQ 49 83 IPR014978 GO:0005524|GO:0005634|GO:0006355
Adu05g01233 345 SMART QLQ_2 48 84 IPR014978 GO:0005524|GO:0005634|GO:0006355
Adu05g01233 345 Pfam WRC 111 153 IPR014977 -
Adu05g01233 345 MobiDBLite consensus disorder prediction 151 178 - -
Adu05g01233 345 ProSiteProfiles QLQ domain profile. 49 84 IPR014978 GO:0005524|GO:0005634|GO:0006355
Adu05g01233 345 PANTHER - 46 336 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01233 Adu-Chr5 17857035 17860930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01233 47 153 GRF Transcription Factor Family AT3G13960 63.964 5.40e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Adu05g01233 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01233 - - ahf:112749828 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01233 05 17857035 17860930 Adu05g01233 05 17857035 17860930 ECH