Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01228 ATGGAGATAACAGGAGTTCAGACATACATAATTAACAGTGCAAAGATTGTGTTCCTGAATGAGAGGCCTCAACCAAGGCCTGGCAAAGGTGTTACCAACACTTGCCAGGTCTGTGATCGCAGCCTCCTTGATTCCTTCTCCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACCTCGAAGAAGTACCAGAAGAAGAAAAAGTTAGATGATGATGATGATTCTGATGGTGAAGAGTCAATGAATGGCAGTGGCAGAAACAGAATCCAGAGCTTCACACCGTCGACACCACCACCAACGGCAGTTACTTACAGGAATGCTAAGAGGAGAAAGGGTATCCCCCATAGAGCTCCAATGGGGGGAGGACTAATAATAGAATACTAA 381 0.4541 MEITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFSFCSLGCKIAGTSKKYQKKKKLDDDDDSDGEESMNGSGRNRIQSFTPSTPPPTAVTYRNAKRRKGIPHRAPMGGGLIIEY 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01228 126 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 121 - -
Adu05g01228 126 MobiDBLite consensus disorder prediction 81 101 - -
Adu05g01228 126 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 121 - -
Adu05g01228 126 Pfam PLATZ transcription factor 1 55 IPR006734 -
Adu05g01228 126 MobiDBLite consensus disorder prediction 59 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01228 Adu-Chr5 17764384 17766770 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Adu05g01228 PLATZ 5.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01228 - - gmx:100810757 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g00872 03 8606266 8608882 Adu05g01228 05 17764384 17766770 ECH
Adu05g01228 05 17764384 17766770 Adu05g01228 05 17764384 17766770 ECH