Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01208 ATGTTTGACACTGGTTACAAGTCACAGTATATTGGAGGCCAGAGGGAGAAGTTTGTAAGGTTGGATGATCTTGATTCTAACATGTCATTCTCAGGCAGACCGAGTTTGATGGATAGGCTAAGATCGATCTTCCATGTTGGCAGCCGCGCAAGGAAGAATCCTTCACAATCCTTTAGGCTAGGAGTGAAGAAAGGATCAGCAGGACTCAGAACATTTGGAAGGTCACTGAAAACTGGTGTAACTACTTGGGCAGTGTTCCCTGAAGATCTCAAAGTTTCAGAGAAGAAAGTGTTTGATCCTCAAGACAAGCACCTTCTCCATTGGAACAAGTTCTTTGAGATCCTCTGCATTTTTTCAGTAGCTGTTGACCCTTTCTTCTTCTATCTCCCTTACTTCAACGTCAAGTCATTCTGCCTCGCCATAGATAGCACACTGGCGAATTTTACAGCAGCACTGAGGACTGTATTGGATTTTATCTATCTCCTGCGCATAAGCTTTCAGTTCCGAACTGCTTATATCGCGCCTTCATCTCGTGTGTTTGGAAGAGGTGAACTTGTCATAGATCCTGCAAAGATTGCCAGTAGATATTTACAGCGATATTTCATTATCGACTTCATGTCTGTGTTTCCTATGCCACAGATTATAGTGTGGAAATATCTATACAAAACAAGACATTCAGAGGTATTGAGTACAAAAACGGCACTGTTGAGAACTGTGATCCTGCAATATTTTCCAAGATTTCTAAGGTTTCTTCCATTAGCATCGGAAGTTAAAAAGACAGCTGGTGTTTTTGCAGAAAATGCACTGCTTGGAGCCATTTACTATTTGATTTGGTTTATGCTAGCTAGTCATATAACTGGCTCCGTTTGGTACTTACTTGCCATAGAACGCAATGACACATGTTGGAACAATGTTTGTCTTGAAGATAATAGATGTAACAGTCATTTCTTGTACTGTGGAAGTACCAATAAGCACATCCCAGGGTTTGATGCTTGGAAAAATGTCAGTGAGGATGTTCTTGTAAAGAAGTGCTTTGTTGATGGTGAGTTCAATTATGGAATCTTTGCTCAAGCAATCAAGAGTGGTATTGTTGCTTCTGTTGAAGTCTTTCCTAAGTTCTGTTACTGTTTATGGTGGGGCCTTCAAAATCTGAGTACAATTGGCCAAGGGCTTTCAACCAGCACCTACAGTAAAGAGGTGTGGTTTTCCATAGCAATAGCTGTTATGGGGCTCATCCTTTTCGCACTTCTGATTGGAAACATGCAGACATACCTTGACTCAATGTCGGTTCATCTTGACGAAATGAGGATCCAAAGACGTGATTCTGAGCTATGGATGCATCATCGCTCGCTTCCTCCAGAACTAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGACGCTATGATCAATACAAGTGGCTGAATACCCGAGGCGTGGATGAAGAGAGCTTGATGAAGAGCCTTCCAAAAGATTTAAGGAGAGATATCAAACGGCATCTTTGTTTGAATCTGGTTAAAAGGGTTCCTCTCTTTGCTAACATGGAGGAACGCCTGCTCGATGCTATATGCGAGCGACTGAAACCTACTCTGTACACAGAGGGCACTGACATAGTTAGGGAAGGAGACCCTGTCAACGAGATGCTCTTCATCATCCGTGGACGCCTAGAGAGTGTCACCACAGATGGTGGAAGGAGTGGATTCTTTAACAGAGGGCTTCTCAAAGAAGGAGACTTCTGTGGTGAGGAGCTACTAACATGGGCACTAGATCCAAAAGCTGCAGCAAACTTGCCATCATCTACTAGGACAGTGAAGGCCATAAATGAGGTCGAGGCATTCGCATTGGAAGCTGAGGAGCTTAAGTTTGTCGCTTCGCAGTTTAGATACATTCATAGTAGGCAGGTTCAGCATACCTTCAGGTTCTACTCACAGCAATGGAGGACATGGGCCGCTATCTACATTCAAGCCGCGTGGAGGAGGTATATGAGGAGGAAACACACCATGCAAAGAAGGCAGGAGGAAGAGTATTATTATGATTCTGATGACAGTGGTGGTGATTCTGCAAAGGCCTTGGTTAAACGTTCCTCAAGTTCATCTAGCTTTGCCACAACCATGTATGCTTCACGCTTTGCCGCGAATGTACTTCACGGTCATAGGCTTCGTGAAGCAGGTAGTTCCACTAGTCTAGGAAGAATTCAAAAACCATCTGAACCTGACTTCAGTCATTATGGTCCAAAGTGA 2244 0.4291 MFDTGYKSQYIGGQREKFVRLDDLDSNMSFSGRPSLMDRLRSIFHVGSRARKNPSQSFRLGVKKGSAGLRTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKHLLHWNKFFEILCIFSVAVDPFFFYLPYFNVKSFCLAIDSTLANFTAALRTVLDFIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLQRYFIIDFMSVFPMPQIIVWKYLYKTRHSEVLSTKTALLRTVILQYFPRFLRFLPLASEVKKTAGVFAENALLGAIYYLIWFMLASHITGSVWYLLAIERNDTCWNNVCLEDNRCNSHFLYCGSTNKHIPGFDAWKNVSEDVLVKKCFVDGEFNYGIFAQAIKSGIVASVEVFPKFCYCLWWGLQNLSTIGQGLSTSTYSKEVWFSIAIAVMGLILFALLIGNMQTYLDSMSVHLDEMRIQRRDSELWMHHRSLPPELRXXXXXXXXXXXRRYDQYKWLNTRGVDEESLMKSLPKDLRRDIKRHLCLNLVKRVPLFANMEERLLDAICERLKPTLYTEGTDIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAAANLPSSTRTVKAINEVEAFALEAEELKFVASQFRYIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRRYMRRKHTMQRRQEEEYYYDSDDSGGDSAKALVKRSSSSSSFATTMYASRFAANVLHGHRLREAGSSTSLGRIQKPSEPDFSHYGPK 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01208 747 CDD CAP_ED 512 643 IPR000595 -
Adu05g01208 747 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 744 - -
Adu05g01208 747 Gene3D Helix hairpin bin 432 503 - -
Adu05g01208 747 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 744 - -
Adu05g01208 747 SUPERFAMILY cAMP-binding domain-like 436 631 IPR018490 -
Adu05g01208 747 SUPERFAMILY Voltage-gated potassium channels 100 425 - -
Adu05g01208 747 ProSiteProfiles cAMP/cGMP binding motif profile. 512 595 IPR000595 -
Adu05g01208 747 Pfam Ion transport protein 108 430 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Adu05g01208 747 Gene3D Jelly Rolls 510 630 IPR014710 -
Adu05g01208 747 Pfam Cyclic nucleotide-binding domain 533 622 IPR000595 -
Adu05g01208 747 ProSiteProfiles IQ motif profile. 648 676 IPR000048 GO:0005515
Adu05g01208 747 Gene3D - 109 428 - -
Adu05g01208 747 SMART cnmp_10 512 643 IPR000595 -
Adu05g01208 747 MobiDBLite consensus disorder prediction 726 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01208 Adu-Chr5 17305403 17309914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01208 6 741 Ion Channels AT1G15990 65.955 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01208 K05391 - gmx:100810453 1134.78