Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01170 ATGGAGGGGACCGAGGAAGTTTCATCTAATTTTCAGGAGAATGTCACTGCAGGGGTGGAAGAGGACCCGATAGAAAATGGGAACTTTGTTGCAGAAACAGAATCCGTTCCGATTGGTGCAAGTCAGTCAGACGATCAAAGAGATGTCATCTTTCTCGACGGAATAGGTTCATTTGGTGTAATTGATTTTGATGCGTTGCGAGATGAGGAGATTATGATGATAGAGTTTGTCGATTTGAAAACTGCTTACGACTTCTATAACGAGTACGGTCGAATTAAGGGGTTTTCCATACGCCGGTCGAAGGTAGGGCGCTGCAAGAAGGCAGGATCTGAGGGCAACATTATATGGCAAATTTTTGTATGCTCGCGACAAGGTGAACGAGATGCAAAGCATGTTCACAGAAATGATAGGAAGATGGATCCTAGACCAGTAACGCGATGCGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCGAGGAACGAGAGATGGTATGTTGACTTCTTCTCCGATGAACATAACCATGACATGTTGGAGGCAAGGTTTAGGGGAATGATGCAGTCTCACCGGGCAATAAAAACGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAATGGTGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGCAATTGAGAAGCAAAGAAGAGCTGGAGCAAGCGACACAGATAATGCACTCAAGTATTTACAAATGTTGAAGAGGCGTGACCCCTGTATGTTTTGGAAGTATTCGTTGGATGAACAACGGAGGCTCCATAATATATTTTGGTGTGATGGTGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATGCAACGTACGGGAGGAATAAGTACAAATGTCTCCTTGTGATATTCTCTGGCGTGGATCACCACATGCGCACTGTTGTGTTTGGATGCGCAGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTGCTTCGGGCATTTCTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACGGTGATCAAGCCATGAAGAGCGCAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACGCAATGCGACCGCTCGAGTAGGTATTCCACGGTTTATGACCAAGTTTCGTCTTTGTTTAATGGGGGATTTGGAGGTCGATGACTTTGAAGATATATGGAATGATGCAGTTGAAGAATTTGGGTTGCAACAAAATTCATGGGTCAAGGATATGTATGAAAGGAAACATATGTGGTCAAATGCCCACATTAGGGGTAAGTTCTTTGCTGGGCTCAAGACAACATCAAGGTGTGAGGCGCTAAATATGCAGATAGGGAAGTTTATACACAACGGCTACAACTTGAGGGAATTTATTGAGCATTTCCAACAGTATTTAGAGTTCATGCGTTGGAGAGTAGTGGTTGCTGATTACAAATCTGCTTATGGAGAACCGGTTGTGAAAACAAGATTAGAGGAGTTAAAGCGGTTTGCAGCAGCAGTATACATACGAGAGGTCTTTGTCTTATTTCGGGAGGTGTTATTACTAGCTAGCAATGTCAGAGTAGTTTCTTCGAAGAAGACAAGCACGTGTACATTGTTTGAGGTGGCCATGTATTGCCAAGGTAGATCATGGAACGTTTCCTGGGGGGAGATAGATGATGAATTCAGATGCTCTTGCCTGCGCATGAAATCTTTTGGAATCCCCTGTGTCCACATAGTTGGTGTGCTTGTTAGACTTAACATGGTTGTTATTCCAGGTAGTCTTATACTGGGTCGTTGGACAAAGAAGGCAAAACAACCACCGATAAATAACCATGTTTTTAGTGGAGAGATTCCTGATGCAGCCTATATGAGTATGCATGCGGCAATGCTCGATGACTGTAGAGAACTGGTAAAGCTTTCTTGTAGTAACTTTGAGGATTACTTCGAGGTGAAGACCAAAATAGCTAATGAACGAGACGCGCTAAGAGAAAAGATTCAAAAAAGGTTGGCGACCACTGCTGAGGGCGAGGGCGATAATGCGTCCATACACGATCCTCCAAGAGCCAGATATAAAGGGTGTGGTCGTCATGTTGTGACGACTCGTGGGAGGTACCGGCGTGTCCAATGTTGCAGAAAGTGTGGCAAGGCTGGCCATAACGCTCGTAGATGCGCAATCGGGAATGGTGAGGACACCACGCATGAATTAGATGCTTTTGGATCATTGCACAACATGGACGAATCACAAGAAGCCGAGGCTTCACAACAGATGGAGTACGATGATCTGAGCTTCTAA 2364 0.4463 MEGTEEVSSNFQENVTAGVEEDPIENGNFVAETESVPIGASQSDDQRDVIFLDGIGSFGVIDFDALRDEEIMMIEFVDLKTAYDFYNEYGRIKGFSIRRSKVGRCKKAGSEGNIIWQIFVCSRQGERDAKHVHRNDRKMDPRPVTRCGCNARIKVHVDSRNERWYVDFFSDEHNHDMLEARFRGMMQSHRAIKTGDLHQINTMRSSGLRVPTIFRAFANQNGGFEMVGFQVKDIYNAIEKQRRAGASDTDNALKYLQMLKRRDPCMFWKYSLDEQRRLHNIFWCDGASQYDFNVFGDVMGFDATYGRNKYKCLLVIFSGVDHHMRTVVFGCAVLSKEGEESYVWLLRAFLEAMKGKAPKSVITDGDQAMKSAIKAVFPEAHHRLCSWHLLRNATARVGIPRFMTKFRLCLMGDLEVDDFEDIWNDAVEEFGLQQNSWVKDMYERKHMWSNAHIRGKFFAGLKTTSRCEALNMQIGKFIHNGYNLREFIEHFQQYLEFMRWRVVVADYKSAYGEPVVKTRLEELKRFAAAVYIREVFVLFREVLLLASNVRVVSSKKTSTCTLFEVAMYCQGRSWNVSWGEIDDEFRCSCLRMKSFGIPCVHIVGVLVRLNMVVIPGSLILGRWTKKAKQPPINNHVFSGEIPDAAYMSMHAAMLDDCRELVKLSCSNFEDYFEVKTKIANERDALREKIQKRLATTAEGEGDNASIHDPPRARYKGCGRHVVTTRGRYRRVQCCRKCGKAGHNARRCAIGNGEDTTHELDAFGSLHNMDESQEAEASQQMEYDDLSF 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01170 787 MobiDBLite consensus disorder prediction 1 24 - -
Adu05g01170 787 Pfam FAR1 DNA-binding domain 84 178 IPR004330 -
Adu05g01170 787 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 630 IPR031052 GO:0006355
Adu05g01170 787 MobiDBLite consensus disorder prediction 1 16 - -
Adu05g01170 787 Pfam MULE transposase domain 298 392 IPR018289 -
Adu05g01170 787 PANTHER OS02G0262500 PROTEIN 71 630 - -
Adu05g01170 787 Pfam SWIM zinc finger 586 609 IPR007527 GO:0008270
Adu05g01170 787 ProSiteProfiles Zinc finger CCHC-type profile. 734 747 IPR001878 GO:0003676|GO:0008270
Adu05g01170 787 ProSiteProfiles Zinc finger SWIM-type profile. 574 610 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01170 Adu-Chr5 16366535 16369001 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu05g01170 FAR1 6.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01170 - - adu:107488338 1607.04