Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01152 ATGGGGTGCATCTGCTCAAAAGAAAAAGATAGAATTGATGATGAAGAAAAGAAAGAAAAAGGGATCAACAAGAATGGTGCATTACAAATCGAAATTGTTCCACCATCAGTCTCAACTACTAATACCTTTCCTACTGCACAATTAGGGGGTGTTCATGGTTTAATGGTGCCTCATTTGGTTAAATCATATGCACAAGTTGCTATGCCAGCAATATTAGAAGATAAAACCAATGACTTGTTATTAGATACTGCAAAACAAAAGCAACAAAAAAGGCAGCACCAGAGATGTAAAACAGTAGGAAGTGGTGAAAATGGAGGAATAGCTGCAAACAAATCAGTCATGAGAAGATTACTTAGCCTCTCGCATATCTCAGGAGAAAACATTGATGCCGGATGGCCAACGTGGTTATCTTCAGTGGCCGGAGAAGCCATCAAAGGGTGGCTTCCTCGACGAGCAGACTCCTTCGAAAAACTAGAGCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAAAGCACTTGATCTTGAAAGTGGTAAATTTGTGGCCCTGAAAAAGGTTCGGTTCTTGAGTAGCGATCTGGCAAGCGTCCGATTCATGGCGAGGGAAATCCATATATTGCGCCAATTAAACCATCCCAATGTGATCAAGCTTGAGGGTCTTGTTGCATCTAGAACTTCCTCCAGTTTGTACCTTGTTTTTGAATACATGGAGCATGATCTTGCTGGATTAGCCGCCACCCCTGGAATCAAGTTCACTGAACCACAGATTAAATGCTTTATGCAGCAACTACTTAGGGGGCTTGAACACTGCCATAGTCGAGGTGTGCTGCACCGCGACATCAAGGGTTCCAATCTTCTAATTGACAACAATGGAAACCTTAAGATAGGAGATTTTGGTCTTGCAACTGTTTATGATCCGGAGAAGAATCAGCAATTAACTAGCCGCGTCGTGACTCTGTGGTACAGGGCACCTGAGCTTTTGTTAGGTGCTACAGAATATGGAGCCGCAATAGACATGTGGAGTGCTGGTTGTATTCTAGCTGAATTGCTCCTAGGGAAGCCTATTATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATTTTTAAGCTTTGTGGTTCCCCATCTGAGGAATATTGGCAGAGAACAAAGTTTCCACATGCAACTAGTTTTAAACCACAGCAGCATTATGAACGCCAAATTGCCAAAACATTTAGAAAGGTCTCTTCTTCAGCACTAGCCCTTGTTGATAAGCTCCTATCTATGGAACCAGAAGATCGAGGATCTGCGACTTGCGCGCTTCAAAGCGAGTTCTTTACTACAGAACCCCTACCATGTGATCCATCAAGTTTACCAAAGTTTCCGCCCACCAAGGAGTTCGACGCCAAGAATCGAAACAAGGAAGTAGCAACGAAAAACACCGAAGCTGTACGAGAACGAAGATTGGTGTCTGAATTGTCGGATGCAGGACAAGATAAAAAACTACCTAGAACACCGGAGTATAATACCCGCGGAGATCTAACATTGAGGGGGAAACCAAATGGTGAGGCTCACTATAAAGTTGATCCAAGTAGATCAGTATGCAATCCAAGCTATGTACATAGTACAACAATGAACAGTGCAGCAATTACAAGACAATCTAAATTTAAGAGATTGGACTCATCTGTTGCCAAAACTCCCGAGTTGCGGACGCAGAAGTCTCAGATAAGTCGAGCAACGGCAGATTTCTCTAACTATTCAAGTAAATGGGAACAAGGAGCCATGCCTGGTCATCAAGAACCCATGATGGAGTATGTGCAAAAGAAAAGTAGGATCCACTGCTCAGGACCGTTGATGCCACCGGGTGGGAACATCGACGATATGCTGAGAGAACATGAGAAACTAATGCAAGAGGCTTTCCGCACTGTGAAGATCAATTCTAGAAACTAA 1929 0.4339 MGCICSKEKDRIDDEEKKEKGINKNGALQIEIVPPSVSTTNTFPTAQLGGVHGLMVPHLVKSYAQVAMPAILEDKTNDLLLDTAKQKQQKRQHQRCKTVGSGENGGIAANKSVMRRLLSLSHISGENIDAGWPTWLSSVAGEAIKGWLPRRADSFEKLEQIGQGAYSSVHKALDLESGKFVALKKVRFLSSDLASVRFMAREIHILRQLNHPNVIKLEGLVASRTSSSLYLVFEYMEHDLAGLAATPGIKFTEPQIKCFMQQLLRGLEHCHSRGVLHRDIKGSNLLIDNNGNLKIGDFGLATVYDPEKNQQLTSRVVTLWYRAPELLLGATEYGAAIDMWSAGCILAELLLGKPIMPGRTEVEQMHKIFKLCGSPSEEYWQRTKFPHATSFKPQQHYERQIAKTFRKVSSSALALVDKLLSMEPEDRGSATCALQSEFFTTEPLPCDPSSLPKFPPTKEFDAKNRNKEVATKNTEAVRERRLVSELSDAGQDKKLPRTPEYNTRGDLTLRGKPNGEAHYKVDPSRSVCNPSYVHSTTMNSAAITRQSKFKRLDSSVAKTPELRTQKSQISRATADFSNYSSKWEQGAMPGHQEPMMEYVQKKSRIHCSGPLMPPGGNIDDMLREHEKLMQEAFRTVKINSRN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01152 642 PANTHER CELL DIVISION PROTEIN KINASE 85 637 - -
Adu05g01152 642 CDD STKc_CDK9_like 155 439 - -
Adu05g01152 642 MobiDBLite consensus disorder prediction 484 500 - -
Adu05g01152 642 Gene3D Phosphorylase Kinase; domain 1 150 242 - -
Adu05g01152 642 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524
Adu05g01152 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Adu05g01152 642 SUPERFAMILY Protein kinase-like (PK-like) 149 447 IPR011009 -
Adu05g01152 642 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 85 637 - -
Adu05g01152 642 MobiDBLite consensus disorder prediction 484 523 - -
Adu05g01152 642 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01152 642 Gene3D Transferase(Phosphotransferase) domain 1 243 479 - -
Adu05g01152 642 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01152 642 SMART serkin_6 155 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01152 Adu-Chr5 16077971 16080667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01152 147 499 Core Cell Cycle Gene Families AT5G10270 48.276 1.38e-117 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Adu05g01152 Pkinase 1.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01152 K08819 - gmx:100817858 733.406