Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01057 ATGGATGGGCGAGAAGCAATGTCATTCTCTGGCGGCCCTGCCTCATTCTACATACATAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGTTGGTGGTTCTCGAACACCAACACAGCCACAACCCGGAGGCTTCCAAGGACCTCCTGGGTTCCGGGCTGTCTCAAACGTGAGAGGTGCTGGTGGCCCTGGTCCTGCTGCTTCTGCATTCTCACCAGAGCCTCAGCATCCTAATTTTGGTCATGGAATCAGCATAGGTTCCTCCTCCCCTGGTGGTGGTGGTGGTGGTGGTGGTGGTAGTGGTGCACCTCCTCCATCTTCAGGGGAGCCTGTAAAGAAGAAAAGAGGGAGGCCAAGAAAGTATGGTCCTGGTGGACCTGTTTCTTTGAGGCTCTCTGCCACTGCTAATTCATCTCCTGGCTCCGGTACTCCCTTGGAAAAGAAGCGGCGCGGACGCCCCCCTGGAAGTGGAAGGAAGCAACAGCTAGCTTCTCTAGGTGAATGGATGAACAGTTCTGCAGGGATGGCCTTCTCACCTCATGTTATAAGTGTTGAACCTGGGGAGGACATTGTAGCCAAGTTATTGTCATTTGCACAGCAGAGACCAAGGGCTGTATGCATAATGTCTGGTACTGGGATAGTTTCTTCGGTCACTATGCGTCAACCTGCTTCTAATACTGTCAGTGTTACTTATGAGGGACGATTTCAAATTTTATGCTTGTCTGGTTCTTATTTGGTTGCGGACGATGGTGGAGCTCGTAGTAGAACAGGCGGCATCAGTGTTTCCCTTTCTAGTCCTGAGGGTCATGTTATTGGTGGTGGCGTTGCTGTGCTTATTGCCGCAACCCCAGTGCAGGTGGTAGTATGCAGTTTTGTATATGGTGGCAGCTCCAAGGCAAAGCCTAAGCAAGTGACAAGCACAAAAGATAGTGGTTCAGAGCCTCAAAGTAGCGACAAGTTAGCTTCTCCGGCAAGTGCACCTCCTCCTAATCAAAACTACAACTCATCTTCATCTGCGGTAGCCATTTGGCCTGGTTCGCAGCCGGCTGATCTTAAAAGTGCACATCCACACACTGGTATTGACCTGACACGTGGATGA 1098 0.5146 MDGREAMSFSGGPASFYIHRGGGGGGGGGGVGGSRTPTQPQPGGFQGPPGFRAVSNVRGAGGPGPAASAFSPEPQHPNFGHGISIGSSSPGGGGGGGGGSGAPPPSSGEPVKKKRGRPRKYGPGGPVSLRLSATANSSPGSGTPLEKKRRGRPPGSGRKQQLASLGEWMNSSAGMAFSPHVISVEPGEDIVAKLLSFAQQRPRAVCIMSGTGIVSSVTMRQPASNTVSVTYEGRFQILCLSGSYLVADDGGARSRTGGISVSLSSPEGHVIGGGVAVLIAATPVQVVVCSFVYGGSSKAKPKQVTSTKDSGSEPQSSDKLASPASAPPPNQNYNSSSSAVAIWPGSQPADLKSAHPHTGIDLTRG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01057 365 MobiDBLite consensus disorder prediction 299 343 - -
Adu05g01057 365 ProSiteProfiles PPC domain profile profile. 172 313 IPR005175 -
Adu05g01057 365 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 365 - -
Adu05g01057 365 SUPERFAMILY AF0104/ALDC/Ptd012-like 176 293 - -
Adu05g01057 365 CDD DUF296 179 291 IPR005175 -
Adu05g01057 365 Gene3D - 179 309 - -
Adu05g01057 365 Pfam Plants and Prokaryotes Conserved (PCC) domain 179 292 IPR005175 -
Adu05g01057 365 MobiDBLite consensus disorder prediction 1 162 - -
Adu05g01057 365 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 365 IPR039605 GO:0003680
Adu05g01057 365 MobiDBLite consensus disorder prediction 296 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01057 Adu-Chr5 14202670 14205862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01057 1 365 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.745 6.35e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01057 - - aip:107643074 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01057 05 14202670 14205862 Adu03g02805 03 105562743 105564550 PCT