Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01054 ATGGGTAGAAAGTTTGAGAGTTGGGACTGCATTAACAGCTTCAAGTGCTGTGGGAATCTGTCTCCTCAGCCACACTACCCCTCCATGACGACATATCCTAAAGGGATGTCGCCGGAAGGATCGGAGGCGAAAGCGGTGTTGAGTGTGATGGGAATGACATGTGCTGCTTGCGCTGGATCCGTGGAGAAATCTATCAAACGCTTACCTGGGATTCTAGAAGCTGCCGTTGATGTATTGAATGATAAAGCTCAGGTTCTATATTATCCATCTATGGTTAATGTGGAGAGAATATGTGAGGCCATTGAAGATGCAGGATTTGAAGCAAAGCTTATTGAAGAAGAATCAAATGATGAACACCCTTTTGAGATATGTAGAATACACATAAGGGGCATGACTTGCACTTCTTGCTCTTCAACTCTTGAATCAGCTCTTCAATCCCTTAGAGGTGTGCACAATGCTCAAGTTGCATTGGCAACTGAAGAAGCAGAAATTCACTATGATCCTAACATTGTAACCTATGATCAACTCAAAGAGGCTATAGAGGACACTGGATTTGAATCCATATTAATAAGCACTGGAGAGCACATAAGCAAAATACATCTTAAAGTTGATGGAATTAAGAATGAACAATCAATAAGTGCTATTCAGAAATCTCTTCAATCTCTTCCTGGAGTTGTAAACATTGACACATATATTGACATCAACAAAATTTCTATAGCTTATAAACCTTACATGACAGGGCCTAGAACCTTCATTCAAGTCATAGAATCTGCAGGTTCTGGATGTTTCAAAGCGGAGATATTTCCGGCCGAAGAAGGAGGGAGGGAGACACATAGGAAGCAGGAGATTAAGCAGTACTTCAAATTCTTCATTTGGAGTTTGGTTTTCACCATTCCTGTGTTTCTAACATCAATGGTTCTTATGTATGTACCTGGAATTAAACATGTTCTTGATATCAAAGTTGTGAATATGCTTAAAGTTGGACAGTTATTGAGATGGGAATTGGCTACACCAGTGCAATTCATCATAGGAAGGAGATTCTACATTGGATCATATAGATCATTGAGAAAAGGCTCTGCCAATATGGATGTATTGATTGCATTGGGAACCAATGCAGCATACTTGTATTCTGTTTATGTGGTGGCAAGAGCTGCATTCTCAAGAGATTTCAAAGGCAATGATTTCTTTGAGACAAGTTCTATGCTGATTTCGTTTATTCTGTTAGGGAAGTATTTAGAGGTGTTGGCCAAAGGGAAAACATCTCAGGCCATTGCTAAGCTTATTGACTTGACACCTGATACAGCAATCCTGTTGAATCAAGATGGTGAAGAACAGATTGATAGCAGGTTGGTACAAAAGAATGATGTGATTAAAGTTGTTCCTGGCGCGAAAGTTGCTTCGGATGGAATTGTTATATGGGGCCAGAGCCATGTCAATGAGAGCATGATAACCGGAGAGGCAAGGCCGGTGGCAAAAAGGAAGGGTGACATGGTGATTGGAGGCACAGTGAATCAGAATGGAGTCTTGCATGTTAAGGTAACAAGGGTTGGATCAGAGAGTGCCCTGTCTCAGATTGTTCGACTAGTCGAGTCTGCTCAGATGGCGAAAGCTCCAGTTCAGAAACTTGCTGATCACATTTCTAAGTACTTTGTTCCTCTTGTCATTGTGCTTTCTTTTTCAACTTGGATTGCTTGGTATTTAGCAGGAAAGTTGCATGCATACCCAAAATCATGGATTCCATCTTCCATGAACAGCTTTGAGCTTGCCCTTCAGTTCGGGATATCGGTAATGGTCATTGCATGCCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTTATGGTTGGTACTGGAGTTGGTGCAACTCAAGGTGTGTTAATCAAAGGTGGACAAGCTCTAGAAAGTGCACATAAGGTTAGCATTGTTACTTTACTTTGGTTATCTCTTTTTACTTCACTCTCAAGTTTCTTAATTTTGCAGGTGAATTGCATTGTGTTTGACAAGACAGGTACTCTCACAATTGGGAAGCCAGTGATTGTAACTACAAAGCTCTTCAAGAACATGTCAGTTCAAGATTTCTATGAACTTGTTGCAGCAGCAGAGGCAAGCCTTCTTCTACTACTAAACACTACACTTGTGAATAGTGAACATCCCATAGCCAGGGCTATTGTTGAGCATGCCAAGAAGATCATCACAGAAGATGAACAGAATCATACCTGGCCAGAAGTGCGCGACTTTGTTTCGATATCAGGCCATGGAGTTAAGGCCATTGTTCAAAACAAGGAGATATTGGCTGGGAACAAAAAACTGATGATGGATCACAACATAGCCATTTCAGTGGATGCTGAAGAAGTTCTAGCAGAAGCTGAGAGATTAGCTCAAACTGGGATTTTAGTATCCTTAGATGGAGAAATAGCTGGAGTCTTGGCTGTATCTGATCCATTGAAACCTGATGCAAAGGAAGTTATCTCAATTCTCAAGTCCATGAAGATCAAAAGCATCATGGTCACAGGTGATAACTGGGGTACTGCTAATTCCATAGCTAGACAAGCTGGTATTGAAACTGTTATGGCAGAAGCCCAACCTCACACTAAAGCTACTCAAGTAAAAGATTTGCAGAATTCTGGCTACACTGTGGCAATGGTGGGAGATGGAATCAATGACTCGCCAGCACTTGTCTCGGCCGATGTAGGAATGGCGATTGGTGCTGGCACAGACATAGCTATTGAGGCAGCAGACATAGTTTTGATGAGAAGCAACTTGGAGGACATAGTAATAGCCATAGACCTTGCAAAGAAAACCTTCAACCGAATTCGCCTCAACTACATTTGGGCACTTGGTTACAACCTCTTATCAATCCCAATTGCTGCAGGCATACTTTACCCTTCCACTAGATTCAGATTGCCACCATGGATTGCTGGGGCTGCAATGGCTGCCTCTTCTATCAGTGTTGTTTGCTCCTCCCTCTTGTTGAAGAATTACAAGAGACCAAACAAGCTAAACAAATTGGACTTAAATGCTATAAAGATTGAGTGA 3036 0.4186 MGRKFESWDCINSFKCCGNLSPQPHYPSMTTYPKGMSPEGSEAKAVLSVMGMTCAACAGSVEKSIKRLPGILEAAVDVLNDKAQVLYYPSMVNVERICEAIEDAGFEAKLIEEESNDEHPFEICRIHIRGMTCTSCSSTLESALQSLRGVHNAQVALATEEAEIHYDPNIVTYDQLKEAIEDTGFESILISTGEHISKIHLKVDGIKNEQSISAIQKSLQSLPGVVNIDTYIDINKISIAYKPYMTGPRTFIQVIESAGSGCFKAEIFPAEEGGRETHRKQEIKQYFKFFIWSLVFTIPVFLTSMVLMYVPGIKHVLDIKVVNMLKVGQLLRWELATPVQFIIGRRFYIGSYRSLRKGSANMDVLIALGTNAAYLYSVYVVARAAFSRDFKGNDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLIDLTPDTAILLNQDGEEQIDSRLVQKNDVIKVVPGAKVASDGIVIWGQSHVNESMITGEARPVAKRKGDMVIGGTVNQNGVLHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVIVLSFSTWIAWYLAGKLHAYPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVSIVTLLWLSLFTSLSSFLILQVNCIVFDKTGTLTIGKPVIVTTKLFKNMSVQDFYELVAAAEASLLLLLNTTLVNSEHPIARAIVEHAKKIITEDEQNHTWPEVRDFVSISGHGVKAIVQNKEILAGNKKLMMDHNIAISVDAEEVLAEAERLAQTGILVSLDGEIAGVLAVSDPLKPDAKEVISILKSMKIKSIMVTGDNWGTANSIARQAGIETVMAEAQPHTKATQVKDLQNSGYTVAMVGDGINDSPALVSADVGMAIGAGTDIAIEAADIVLMRSNLEDIVIAIDLAKKTFNRIRLNYIWALGYNLLSIPIAAGILYPSTRFRLPPWIAGAAMAASSISVVCSSLLLKNYKRPNKLNKLDLNAIKIE 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01054 1011 CDD HMA 46 109 IPR006121 GO:0046872
Adu05g01054 1011 Gene3D - 417 533 - -
Adu05g01054 1011 SUPERFAMILY Calcium ATPase, transmembrane domain M 398 707 IPR023298 -
Adu05g01054 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 402 642 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g01054 1011 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 714 961 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Adu05g01054 1011 Gene3D - 657 939 IPR023214 -
Adu05g01054 1011 SFLD Haloacid Dehalogenase 660 933 - -
Adu05g01054 1011 PRINTS P-type cation-transporting ATPase superfamily signature 829 839 - -
Adu05g01054 1011 PRINTS P-type cation-transporting ATPase superfamily signature 807 818 - -
Adu05g01054 1011 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Adu05g01054 1011 PRINTS P-type cation-transporting ATPase superfamily signature 905 917 - -
Adu05g01054 1011 PRINTS P-type cation-transporting ATPase superfamily signature 665 679 - -
Adu05g01054 1011 PRINTS P-type cation-transporting ATPase superfamily signature 479 493 - -
Adu05g01054 1011 Gene3D - 197 259 - -
Adu05g01054 1011 SUPERFAMILY HMA, heavy metal-associated domain 193 263 IPR036163 GO:0046872
Adu05g01054 1011 CDD P-type_ATPase_Cu-like 290 993 - -
Adu05g01054 1011 SUPERFAMILY HMA, heavy metal-associated domain 122 194 IPR036163 GO:0046872
Adu05g01054 1011 ProSiteProfiles Heavy-metal-associated domain profile. 123 189 IPR006121 GO:0046872
Adu05g01054 1011 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 20 1002 - -
Adu05g01054 1011 SFLD p-type atpase 660 933 IPR044492 -
Adu05g01054 1011 CDD HMA 128 186 IPR006121 GO:0046872
Adu05g01054 1011 PANTHER ATP7, ISOFORM B 20 1002 - -
Adu05g01054 1011 Pfam Heavy-metal-associated domain 47 107 IPR006121 GO:0046872
Adu05g01054 1011 Pfam Heavy-metal-associated domain 126 186 IPR006121 GO:0046872
Adu05g01054 1011 ProSitePatterns Heavy-metal-associated domain. 128 157 IPR017969 GO:0046872
Adu05g01054 1011 Pfam E1-E2 ATPase 430 621 - -
Adu05g01054 1011 ProSitePatterns E1-E2 ATPases phosphorylation site. 667 673 IPR018303 -
Adu05g01054 1011 TIGRFAM TIGR00003: copper ion binding protein 45 108 IPR006122 GO:0005507
Adu05g01054 1011 TIGRFAM TIGR00003: copper ion binding protein 126 186 IPR006122 GO:0005507
Adu05g01054 1011 SUPERFAMILY HAD-like 664 988 IPR036412 -
Adu05g01054 1011 Pfam haloacid dehalogenase-like hydrolase 661 896 - -
Adu05g01054 1011 ProSitePatterns Heavy-metal-associated domain. 49 78 IPR017969 GO:0046872
Adu05g01054 1011 PRINTS Copper-transporting ATPase 1 signature 44 69 - -
Adu05g01054 1011 PRINTS Copper-transporting ATPase 1 signature 70 93 - -
Adu05g01054 1011 PRINTS Copper-transporting ATPase 1 signature 146 167 - -
Adu05g01054 1011 Gene3D - 763 813 IPR023299 GO:0000166
Adu05g01054 1011 Gene3D - 673 762 IPR023299 GO:0000166
Adu05g01054 1011 Gene3D - 122 190 - -
Adu05g01054 1011 SUPERFAMILY Calcium ATPase, transduction domain A 432 529 IPR008250 -
Adu05g01054 1011 ProSiteProfiles Heavy-metal-associated domain profile. 44 110 IPR006121 GO:0046872
Adu05g01054 1011 ProSiteProfiles Heavy-metal-associated domain profile. 198 259 IPR006121 GO:0046872
Adu05g01054 1011 Gene3D - 39 110 - -
Adu05g01054 1011 SUPERFAMILY HMA, heavy metal-associated domain 40 114 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01054 Adu-Chr5 14157471 14173271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01054 118 259 Primary Pumps ATPases AT1G63440 29.655 6.07e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01054 K17686 - gmx:100817431 1504.19