Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01052 ATGGTCGCTCTTGTGGCTTCTGATTCTCTGCCCCCAAATGAAGTTTGGGCGCTTTCTAGCTTCAAAGAAGCCATGTATGATGACCCTTTTCTAGCTCTATCCAATTGGAATACGATAGATTCAGATCCTTGTAACTGGTTTGGTGTCTTATGCACTACTGCTAGAGATCATGTCATCAAACTAAACATTTCAGGATCATCGTTGAAGGGATTTCTTGCACCAGAGTTGGGGCAAATCACCTACTTGCAAGAACTAATTTTGAGCGACAATGAACTCATAGGAATAATACCTAAAGAGTTGAGCATGTTGAAGTCCCTTAAGGTGCTGGACTTGGGAAATAATCAGTTATCCGGACCAATTCCTCCAGAGCTTGGAAATTTAACTGAACTCGTGAACATGAATCTGCAGTCCAATGATCTGACTGGCAGGTTACCTCCGGAGCTTGGGAATTTGAAATACCTTCAAGAACTTCGGCTCGATAGGAATAAGCTCCAAGGGCCTGTTCCTGGTGGTGACAGTTCAAATTTTTCCTCAACTATCAATGGGATGTATGCTACAAATGCAAATTTAACTGGCTTCTGTCGTTGGTCTCAGTTAAAAGTAGCGGACTTTTCGTATAACTATTTAGTTGGCAGCATACCTGATTGCTTGCATTATCTTCCAAGGTATTCTTCTGATACCATTATCATCTTGGTTGGTTGGTTTTCTCGTCCACCATCATATTTAACAAAAATATGTTTTCTGCCAATCAGTTTATACTTTCAAGGAAACTGCCTTCAGATTCAGAACAAAGATGCAAAGCAGCGGCCCTCTATTCAATGTGCCGGTGCATCACCTGCAAGAAGCCAGCCATTGGTGAATCCTAATATGTATGTGTCGAAGCATCATGGAGCATCAAAACCTGTTTGGCTTCTGGCTCTAGAAATAATAACGGGAACCATGGTTGGTTCTCTCTTTCTGATTGCCCTTCTCGCTGCCCTTCAGAGGTGGAATAAAAAAGCATCCATCATTATTCCTTGGAAAAAATCTACAAGCCAGAACGACAGCACGACAGTATATATAGACCCCGAGATGTTGAAGGATGTGAGAAGGTATACCAGACAAGAGCTTGAAGTTGCCTGCGAAGACTTTAGCAACATAATCGGGTCATCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATCTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAAAGAGAGGTGGCAGACTTGGCAAGGTTAGATCATGAGAATACAGGAAAACTGCTGGGGTATTGTAGAGAGAGCACTCCATTTACAAGGATGTTAGTTTTTGAATATGCTTCAAATGGGACACTTCATGAGCACCTACATTGCTACGGAGAAAGATGTCAATTCTCCTGGACAAGGCGTATGAAAATCATAATAGGCATTGCGCGTGGGCTCAAGTATCTACATACGGAAATTGAGCCTCCATTCACTATTTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCCAAGTTGGTTGATTTCGAAAGTTGGAAGACAATCCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTGGCAGTCAAGGTGCTATTTGTGTCCTTCCAAATTCCGTGGAGGCTCGCCATCTCGATACAAAAGGAAACATACATGCTTTCGGGGTACTTCTACTGGAGATAATCAGTGGAAGACTTCCATACTGCAAGAACAAGGGGTACTTGGTTGATTGGGCCAAGGACTATCTTGAAATGCCAGAAGTGATGTCATATGTGGTGGATCCGGAATTGAAACATTTCAGATATGATGACCTCAAAGTGATATGTGAAGTAGTGAGCCTCTGTATCAACCCTGATACCACTGCTCGCCCGTCTATGCGAGAATTATGCGTCATGCTTGAGAGCAGAATCGACACGTCAACTAGCGTGGAGCTCAAGTCATCATCATTGGCCTGGGCTGAACTTGCACTCTTATCATAA 2025 0.4291 MVALVASDSLPPNEVWALSSFKEAMYDDPFLALSNWNTIDSDPCNWFGVLCTTARDHVIKLNISGSSLKGFLAPELGQITYLQELILSDNELIGIIPKELSMLKSLKVLDLGNNQLSGPIPPELGNLTELVNMNLQSNDLTGRLPPELGNLKYLQELRLDRNKLQGPVPGGDSSNFSSTINGMYATNANLTGFCRWSQLKVADFSYNYLVGSIPDCLHYLPRYSSDTIIILVGWFSRPPSYLTKICFLPISLYFQGNCLQIQNKDAKQRPSIQCAGASPARSQPLVNPNMYVSKHHGASKPVWLLALEIITGTMVGSLFLIALLAALQRWNKKASIIIPWKKSTSQNDSTTVYIDPEMLKDVRRYTRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLDHENTGKLLGYCRESTPFTRMLVFEYASNGTLHEHLHCYGERCQFSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSVEARHLDTKGNIHAFGVLLLEIISGRLPYCKNKGYLVDWAKDYLEMPEVMSYVVDPELKHFRYDDLKVICEVVSLCINPDTTARPSMRELCVMLESRIDTSTSVELKSSSLAWAELALLS 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01052 674 Pfam Leucine rich repeat 81 140 IPR001611 GO:0005515
Adu05g01052 674 Gene3D Transferase(Phosphotransferase) domain 1 457 665 - -
Adu05g01052 674 Gene3D Phosphorylase Kinase; domain 1 348 456 - -
Adu05g01052 674 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 224 - -
Adu05g01052 674 SUPERFAMILY Protein kinase-like (PK-like) 351 649 IPR011009 -
Adu05g01052 674 Gene3D Ribonuclease Inhibitor 11 265 IPR032675 -
Adu05g01052 674 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 253 672 - -
Adu05g01052 674 Pfam Protein tyrosine and serine/threonine kinase 379 646 IPR001245 GO:0004672|GO:0006468
Adu05g01052 674 ProSiteProfiles Protein kinase domain profile. 375 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g01052 674 PANTHER PROTEIN MALE DISCOVERER 2 9 224 - -
Adu05g01052 674 SUPERFAMILY L domain-like 11 221 - -
Adu05g01052 674 Pfam Leucine rich repeat N-terminal domain 13 51 IPR013210 -
Adu05g01052 674 PANTHER PROTEIN MALE DISCOVERER 2 253 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01052 Adu-Chr5 14148773 14152139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01052 13 649 Receptor kinase-like Gene Family AT2G01210 27.004 1.30e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Adu05g01052 PK_Tyr_Ser-Thr 5.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01052 - - ahf:112749652 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01052 05 14148773 14152139 Adu03g02820 03 106399622 106404417 PCT