Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01039 ATGGGCTTTGGGGGGAGAGGCGCGTCTATAAAAGTTTGGAGTAGTGCAGAAACCCTAGTTCCGAGTTGGAGTAGCTTGAACCCTTCCAACGAAGGAGTCTGCGCGATGGGTGCCTACAAGTATGTCTCTGAGCTATGGCGCAAGAAGCAGTCAGATGTCATGAGGTTCCTTCAGCGTGTAAGGTGCTGGGAATATCGTCAGCAACCTTCCATTGTTCGTGTGACAAGACCTACACGCCCTGACAAGGCCCGTCGCCTAGGTTATAAGGCTAAGCAGGGCTATGTTGTTTACCGTGTTCGTGTAAGGAGGGGTGGCCGCAAGAGACCAGTACCCAAAGGTATTGTTTATGGTAAGCCAACAAACCAGGGTGTTACCCAACTGAAATTCCAGAGGAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGAAGGAAGTTGGGTGGCCTTAGGGTCCTCAATTCTTATTGGGTGAATGAGGATTCAACCTACAAGTACTTTGAGATAATTATGGTAGATGTTGCCCATGCTGCCATCAGAAATGATCCAAGAATCAATTGGCTGTGCAATCCAGTGCACAAACACAGGGAATTGCGTGGACTTACTTCAGCTGGCAAAAGCAACAGAGGTCTACGTGGCAAGGGACATCTTTATCACAAAAATCGTCCATCCCGCAGGGCAACCTGGAAGAGAAACAACNNNNNNNNNNNTTATCGTTGA 714 0.4832 MGFGGRGASIKVWSSAETLVPSWSSLNPSNEGVCAMGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIIMVDVAHAAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGKGHLYHKNRPSRRATWKRNNXXXXYR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01039 237 Pfam Ribosomal L15 37 225 IPR000439 GO:0003735|GO:0005840|GO:0006412
Adu05g01039 237 SMART Ribosomal_L15e_2 37 228 IPR000439 GO:0003735|GO:0005840|GO:0006412
Adu05g01039 237 Gene3D Ribosomal protein l15e 36 237 IPR024794 GO:0003735|GO:0005840
Adu05g01039 237 PANTHER RIBOSOMAL PROTEIN L15 23 233 IPR000439 GO:0003735|GO:0005840|GO:0006412
Adu05g01039 237 PANTHER RIBOSOMAL PROTEIN L15 23 233 - -
Adu05g01039 237 ProSitePatterns Ribosomal protein L15e signature. 81 104 IPR020925 GO:0003735|GO:0005840|GO:0006412
Adu05g01039 237 MobiDBLite consensus disorder prediction 199 223 - -
Adu05g01039 237 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 35 230 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01039 Adu-Chr5 13990981 13993408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01039 36 231 Cytoplasmic Ribosomal Protein Gene Family AT4G17390 91.837 9.11e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01039 K02877 - gmx:100306052 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01039 05 13990981 13993408 Adu01g01406 01 35858314 35860495 PCT