Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01018 ATGGAGAGGCACAGATGCAAGCTTTGTTCGAGGACATTCGCCAATGGCAGAGCCCTCGGTGGTCACATGAAGGCTCACTTAGCCACGCTTCCTCTGCCACCCAAGCCTCATCAACCACCTCCTCAACCACTTTCTTTTGAGTACTCCTCTTCTTCTTCCTCTTCAGAATCAGAACACGATGACGATGATGATGAAGAAAAAGCATCAATAGCAACAGAGGCAGCAGAGCCTGTTAGCTCCGTTTCCGATACTTCGCCGGAAGAAGACCTGGCCATGTGCCTCATCATGCTGTCAAGGGACAAATGGAGAAAGACAAGTTTTGAAGAAGAAGAAGAGATGAAGTTGAAGAACAAGAAGGTTCTTCGAGGGAAGCATCATCATCATCATCATCATCGTCTGCAGTGTGACAAGTGTGGGAAAACGTTTCGATCTTCAGGGGCATTGGGGAGCCACAGAAGCATATGCCTCTGTGATGAAGCTGATGGAAGTGAAAGAATCTTTCAATGCCCGTATTGTTCAAAGGTTTTCGGGTCGGGTCAAGCACTCGGTGGCCATAAGAGATCTCATCTTCTCCCATCTTCTTCTTCTTCTTCTCCTGCTTCCATTATCAATGCTAATCTTAGATTGAAACAACAAAGCTTCATAGATCTCAACTTGCCAGCTCCACCTGAAGAAGACGACCTTAGTGTTCTCTCCGATGCATAA 705 0.4667 MERHRCKLCSRTFANGRALGGHMKAHLATLPLPPKPHQPPPQPLSFEYSSSSSSSESEHDDDDDEEKASIATEAAEPVSSVSDTSPEEDLAMCLIMLSRDKWRKTSFEEEEEMKLKNKKVLRGKHHHHHHHRLQCDKCGKTFRSSGALGSHRSICLCDEADGSERIFQCPYCSKVFGSGQALGGHKRSHLLPSSSSSSPASIINANLRLKQQSFIDLNLPAPPEEDDLSVLSDA 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01018 234 MobiDBLite consensus disorder prediction 28 86 - -
Adu05g01018 234 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 72 234 IPR044303 GO:0006355
Adu05g01018 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 133 154 IPR013087 -
Adu05g01018 234 Pfam Zinc finger, C2H2 type 134 153 IPR013087 -
Adu05g01018 234 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 72 234 - -
Adu05g01018 234 SUPERFAMILY beta-beta-alpha zinc fingers 133 189 IPR036236 -
Adu05g01018 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Adu05g01018 234 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 69 - -
Adu05g01018 234 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 69 IPR044303 GO:0006355
Adu05g01018 234 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 189 IPR013087 -
Adu05g01018 234 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Adu05g01018 234 Gene3D Classic Zinc Finger 132 189 - -
Adu05g01018 234 Pfam C2H2-type zinc finger 3 28 - -
Adu05g01018 234 Pfam C2H2-type zinc finger 167 189 - -
Adu05g01018 234 SMART c2h2final6 4 26 IPR013087 -
Adu05g01018 234 SMART c2h2final6 167 189 IPR013087 -
Adu05g01018 234 SMART c2h2final6 133 153 IPR013087 -
Adu05g01018 234 ProSitePatterns Zinc finger C2H2 type domain signature. 169 189 IPR013087 -
Adu05g01018 234 SUPERFAMILY beta-beta-alpha zinc fingers 3 29 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01018 Adu-Chr5 13570144 13570954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01018 1 231 C2H2 Transcription Factor Family AT3G60580 32.534 6.71e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu05g01018 zf-C2H2_6 1.2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01018 - - adu:107488121 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01018 05 13570144 13570954 Adu01g01420 01 36493839 36495059 PCT