Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g01014 ATGGATGAACCAAATGAAGCACCAGAAAACCGAGAACTCTACGCACTTCTCAACTTGTCTCCAGAAGCTTCCGATGAAGAAATCCGCAGAGCTTATCGCCAATGGGCGCAAGCATATCACCCTGATAAATACCAATCCCCTCACATGAAAGATATTGCTACGGAGAATTTTCAACGCATATGTGAGGCCTACGAGATACTGTCAGATTCAAATAAGAGGCAAATATATGATATATATGGCATGGAAGGTGTGAATTCTGGTTTGGAGCTGGGTGCGACTTTGAATAGAGCTGAGGAGATAAAGGCGGAGCTGGAGAGGCTCAAGAGGATGAAGGAACGGGAGAAGATGGCCGCGCATTTTCGATCTTCGGGTACAATTCTCGCCAATATGTCTTTGCCACACTGTCTAAATGGTGATGGCCTCTTCAGAGGAATGGCCATGACAAGCGAAATTCAGTCTGACTTATCGAAGCGTGATGCTATTACAATTGGTGGCAATTTAGCAGTAGATGGAAATGAAGGTGGTGGAGCTGCCACTGCAGTATTCAGGCATCAAATTTCTGAAGCTTCCTCAGTAGAATTAGTGGCTTCAGCTGGTTTACGTGCACTAGTTGGAGTGCAAGCATCTCGTACTTTATCATCACACTCAGCTGCAACAATGGGCCTTGCGCTGTCTTTGCAAGATGGTTCGTTGAATCTTTCAAATTTATGGACCCGCCAATTGTCAGAAACTGCAAGTGGACATATACAGCTTGCTTTGGGAACACAGTCGTCTATAGCTGTCGGCTGGCAAAAGAAAGACGAGAGGAGGTCTGCTTCTGGGGAAGTAAAGTTTGGCACAGGTTCCTTTGATACATCAGTTCATTATACTCATCGCTTTTCTCCTAAATCACTTGGCTGCATTGGAGGAAGAGTAGGAAGTTCTTCCCTTGAGATTGAAGTTGGTGGTGGGAGGAAGATCTCTAAATTCAGCACCGTGCGCTGGTTGTATACAATAGGAATTCAGGGTATTTTCTGGAAATTTGAACTACATCGTGGGGGCCAAAAGTTGATTATTCCTGTAAGGACAAGCAGACACCACTCTGGAGCATTGGTGGTTCCAGCATCTATGTACTTTCTACTGAAGAAATTCATCATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAAGCTCTAGAGAAGGACGAGAAAACATCTTCACAGGTTAAAGAAGCAAGGGCAGCAGCAGAGAAAGCTCAGAAATTACAAGAAAATGTGGCTAACAGGAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATGAAAGAGTTTTGTGCAACTTAAATTCGTCAAGTGAGACAAGTCTTGAATCAACTTCAGAAGTCATTGATGTCACCATTCCTCTTAATTTTCTAGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCGGGCATCATGGGGTTTTGTGATCCATGTCCAGGAGAGCCTAAACAGTTGTATATAGAGTATGCTTATGCTGGCAATGAATACAAGGTTTCGGTTGTTTTCCCTTCGATTACAACATTTTCTCCTGTTAAATTGAATGCAAGAGGAGGTGATTGTAGAATTTCGTCAAGGCATTGCGCATTGCGCATTGCGCATTGCAGTATGTTACGCAGCTGCTAA 1683 0.4302 MDEPNEAPENRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQSPHMKDIATENFQRICEAYEILSDSNKRQIYDIYGMEGVNSGLELGATLNRAEEIKAELERLKRMKEREKMAAHFRSSGTILANMSLPHCLNGDGLFRGMAMTSEIQSDLSKRDAITIGGNLAVDGNEGGGAATAVFRHQISEASSVELVASAGLRALVGVQASRTLSSHSAATMGLALSLQDGSLNLSNLWTRQLSETASGHIQLALGTQSSIAVGWQKKDERRSASGEVKFGTGSFDTSVHYTHRFSPKSLGCIGGRVGSSSLEIEVGGGRKISKFSTVRWLYTIGIQGIFWKFELHRGGQKLIIPVRTSRHHSGALVVPASMYFLLKKFIIKPYYLRRNKQKALEKDEKTSSQVKEARAAAEKAQKLQENVANRKRNKQLETGGLVIMRALYGNERVLCNLNSSSETSLESTSEVIDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGEPKQLYIEYAYAGNEYKVSVVFPSITTFSPVKLNARGGDCRISSRHCALRIAHCSMLRSC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g01014 560 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Adu05g01014 560 Coils Coil 402 425 - -
Adu05g01014 560 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Adu05g01014 560 Coils Coil 90 117 - -
Adu05g01014 560 Pfam DnaJ domain 13 77 IPR001623 -
Adu05g01014 560 Pfam DnaJ-like protein C11, C-terminal 381 520 IPR024586 -
Adu05g01014 560 Gene3D DnaJ domain 4 105 IPR036869 -
Adu05g01014 560 PANTHER CHAPERONE PROTEIN DNAJ 13 1 520 IPR042162 -
Adu05g01014 560 SMART dnaj_3 11 72 IPR001623 -
Adu05g01014 560 CDD DnaJ 12 69 IPR001623 -
Adu05g01014 560 SUPERFAMILY Chaperone J-domain 9 88 IPR036869 -
Adu05g01014 560 PRINTS DnaJ domain signature 32 47 IPR001623 -
Adu05g01014 560 PRINTS DnaJ domain signature 52 72 IPR001623 -
Adu05g01014 560 PRINTS DnaJ domain signature 14 32 IPR001623 -
Adu05g01014 560 PRINTS DnaJ domain signature 72 91 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g01014 Adu-Chr5 13455492 13461999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g01014 9 77 C2H2 Transcription Factor Family AT1G74250 42.254 9.45e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g01014 K09531 - gmx:100817782 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g01014 05 13455492 13461999 Adu05g01014 05 13455492 13461999 ECH