Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00999 ATGGGGCCAATGGACTTGAATTCGAGCCATGTTTCTCCTGTTCTTACGGATTCTGTACCTGTGAACAAATCAAGACTAGGAATCCATTCTAGTCTGCTAACATACTCCCAGCAAGATTCATCTTCACCGCACTCGGCAGCACCCGCCCCGGCGGGGAAGCTGCCGAGAACGGGTTCAAGAAAGAGTGCTGCTGGGAGCATTGATGATGTTCGGTTCAATGGGTGGTTGGACGCCATGAAGGCATCTTCCCCTCCCAGGAAGAAGCTTCTTAAAGGATCCATGATTAATGCTCTGCTTCCTTCCAATATTGAATATGACAACGAAGACTACCATATATTGACCGTTGATTACCCTTCTGCACTAGAATGTTTTGAGAAAATCGTAGAGCGTGCCAAGAATAACAAGGTTGCAGTGTTTCTAGATTACGATGGCACTCTTTCTCCAATTGTAGATGACCCTGACTGTGCCTTTATGTCCGAACCTATGCGTGAGACTGTGAGGAGCGTGGCAAGGTGTTTCCCCACAGCAATTATCAGTGGAAGAAGTCGTGACCAGGTGTATGATTTGGTTAAACTAACAGAACTGTACTATGCGGGTAGTCATGGAATGGACATAATTGGGCCTTTTCGCCATAATATGTCCAATAAACTTCCAAATTGTGTCAATTCTACTGACCATCAGGGAAATCAGATAACTCTCTTTCAACCTGCTACACAATTCCTCCCTATCATTGACGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGATATAAGCGGTGCAAAAGTTGAAAACCACAAGTTTTGTGTTTCTGTACATTACCGTAACGTACAAGAGAACAATTGGACAATTATAGGACAACGTGTCCATGATATCTTGAAAAAATTCCCTGGTTTGCGTTCAACTCATGGACGGAAGGTTTTAGAGGTTCGTCCAGTGATTGACTGGAACAAAGGGAAAGCGGTTGAATTTTTAATGGAATCTCTTGATTTAAATGATAATGATGATGTACTTCCTATCTACATTGGAGATGATAAAACCGATGAAGATGCTTTTAAGATTCTGCGTGAAAGCAATCGTGGTTGTGGGATTTTAGTGTCTTCAGTGAAAAAAGAAAGCAATGCCTCATACTCTCTAAGAGACCCCAATGAGGTCATGGAATTTCTTCAACTCCTGGTTAGGTGGAAAGAGAGAGAAGAAACCAACCATTTCAACAAGCAAATTAAAGTCAAAGTATAG 1239 0.4229 MGPMDLNSSHVSPVLTDSVPVNKSRLGIHSSLLTYSQQDSSSPHSAAPAPAGKLPRTGSRKSAAGSIDDVRFNGWLDAMKASSPPRKKLLKGSMINALLPSNIEYDNEDYHILTVDYPSALECFEKIVERAKNNKVAVFLDYDGTLSPIVDDPDCAFMSEPMRETVRSVARCFPTAIISGRSRDQVYDLVKLTELYYAGSHGMDIIGPFRHNMSNKLPNCVNSTDHQGNQITLFQPATQFLPIIDEVFRTLVEITKDISGAKVENHKFCVSVHYRNVQENNWTIIGQRVHDILKKFPGLRSTHGRKVLEVRPVIDWNKGKAVEFLMESLDLNDNDDVLPIYIGDDKTDEDAFKILRESNRGCGILVSSVKKESNASYSLRDPNEVMEFLQLLVRWKEREETNHFNKQIKVKV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00999 412 CDD HAD_TPP 137 387 - -
Adu05g00999 412 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 138 356 IPR006379 -
Adu05g00999 412 TIGRFAM T6PP: trehalose-phosphatase 134 394 IPR003337 GO:0003824|GO:0005992
Adu05g00999 412 Gene3D - 136 223 IPR023214 -
Adu05g00999 412 Gene3D - 246 408 IPR023214 -
Adu05g00999 412 MobiDBLite consensus disorder prediction 36 64 - -
Adu05g00999 412 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 4 402 - -
Adu05g00999 412 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 4 402 IPR044651 GO:0004805|GO:0005992
Adu05g00999 412 SUPERFAMILY HAD-like 137 395 IPR036412 -
Adu05g00999 412 Pfam Trehalose-phosphatase 139 382 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00999 Adu-Chr5 13231489 13234976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00999 132 392 Trehalose Biosynthesis Gene Families AT1G70290 24.460 4.94e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00999 K01087 - tcc:18606311 507.294