Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00996 ATGGGAGTGGTGACAGGTGCTGTGGCAGTGGAAGTGAAAGAAAAGGGAAGGAGATCGGAGGAGATAATCTACGTACAGCGATTCTACTTGGAGTTCTTAGGTGCAAGATATATCAAGCTAAGGAGGTTTGAAATGAACGCATTTTCACATGTTCCTCCTGGGTTTCGGTTCCATCCTACGGATGAAGAACTTGTTGATTACTACCTGAGGAAAAAGATAGCTTCGAAAAGGATTGATCTGGATGTGATAAAAGATGTGGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAAATATGCAAAATAGGAAGCGATGATGAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTACCCAACAGGGACTCGCACCAATAGAGCTACAAAGGCAGGATTCTGGAAAGCCACGGGAAGAGACAAAGCCATATACTCAAGCTCAAGCCATTGCCTCGTTGGTATGAGAAAGACTCTTGTGTTCTACAAAGGACGAGCTCCCAATGGCCTCAAATCAAACTGGATCATGCACGAGTATCGTCTTGACTCCAATCAGGAAGATGGCTGGGTTGTGTGCAGAGTCTTCAAGAAGCGGATGCCCACGCTACGCAACGTGGTAGACTATGATGATCAACTTCCCTTCATGCAAGGATCTCCATCCACTCACTATCCCTGCAAGCACGAGCTTCATCAATTCCAATACAACACCCATGATGCTTTTCTCCAACTTCCACACCTTGAGAGCCCTAATCAAGTTTTGAGTTGCGGCAGCCCCGTTATTGCACCCTATGCCTACGCCGAAAACAACAACAACAATAATGGAACTAGTAGTACTAGTGCTTTGCAGTCCTATTCATCTGAACGCATTCAGCAACAACTTCACTTGCTTTATGGTAGCAATATTGAGCAAGCAGTAGTGATGGACCAAGTCACGGATTGGAGAGTGCTTGACAAATTTGTTGCTTCTCAACTCATGAGTCAAGATCAAGATCAGGCTTCCAAGGAAACCTGCAGCGTGGCTGATGAACAACATGTTGCTACTACTGTGCTTCCAAATGGATCCACGAAGCAGGAAATGGTGCCTCAGGACGACTATGTTTCAACGTCTGCCTCCAGTAACTGCGATATTCACCTGTGGAATTGA 1143 0.4479 MGVVTGAVAVEVKEKGRRSEEIIYVQRFYLEFLGARYIKLRRFEMNAFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQEICKIGSDDENEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSSSSHCLVGMRKTLVFYKGRAPNGLKSNWIMHEYRLDSNQEDGWVVCRVFKKRMPTLRNVVDYDDQLPFMQGSPSTHYPCKHELHQFQYNTHDAFLQLPHLESPNQVLSCGSPVIAPYAYAENNNNNNGTSSTSALQSYSSERIQQQLHLLYGSNIEQAVVMDQVTDWRVLDKFVASQLMSQDQDQASKETCSVADEQHVATTVLPNGSTKQEMVPQDDYVSTSASSNCDIHLWN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00996 380 Pfam No apical meristem (NAM) protein 52 181 IPR003441 GO:0003677|GO:0006355
Adu05g00996 380 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 48 366 - -
Adu05g00996 380 ProSiteProfiles NAC domain profile. 51 197 IPR003441 GO:0003677|GO:0006355
Adu05g00996 380 SUPERFAMILY NAC domain 46 197 IPR036093 GO:0003677|GO:0006355
Adu05g00996 380 Gene3D NAC domain 60 200 IPR036093 GO:0003677|GO:0006355
Adu05g00996 380 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 48 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00996 Adu-Chr5 13126411 13131411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00996 45 379 NAC Transcription Factor Family AT1G12260 52.247 1.66e-113 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Adu05g00996 NAM 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00996 - - ahf:112800892 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00996 05 13126411 13131411 Adu01g01501 01 42011273 42012273 PCT