Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00994 ATGGCCGACGAAGCTAAAGCCAAAGGCAACGCCGCCTTCTCCTCCGGCGATTACGCCGCGGCCGTACGCCATTTCTCCGACGCCATAGCTCTCTCCCCGGACAACCACGTTTTGTACTCCAACCGATCCGCCTCCTACGCCTCCCTCAAGAAGTACTCCGACGCCTTAGCCGATGCCAAGAAGACGGTGGAGCTCAAGCCCGACTGGTCCAAGGGCTACAGCCGCCTCGGCGCCGCCCACCTCGGCCTCTCCCAATACGACGACGCTATTGCAGCATACAAAAAGGGCCTCGAAATCGACCCCAACAACGAGCCCCTCAAATCCGGCCTGGCTGATGCCCAGGCAGCCGCCTCCAGGGCCCGCTCGGCCCCTGCAAACCCCTTCGGGGACGCCTTCTCAGGGCCAGAGATGTGGGCTCGGCTCACTGCAGACCCAACCACTAGGGTTTATCTTCAGCAGCCGGATTTCGTGAAGATGATGCAGGATATTCAGAAGGATCCAAACAAATTGAACTTGTACTTGAAGGATCAGAGGGTTATGCAGGCCATTGGCGTCTTGCTCAATGTCAAGATTCGAACCCCAACTGATGATGCTGACATGCCAGAGTCCTCTTCTCCTTCTCCTTTCCCTTCCCCCTCCCCCTCCCCCTCCGAGAGGAAGAGGGCGGCTGAAGCGGAGCCTCCAAGGCAGCCCGAACCTGAGCCAGAGCCCGAGCCCATGGACTTGTCGGAGGAGGAGAAGGATAAGAAGCTGAGGAAGGCGGAGGCGCAGAAGCAGAAGGAGGCTGGGAACGCAGCGTACAAGAAGAAGGATTTTGATACAGCTATTCATTATTACTCGAAGGCTTTGGAGTTGGATGATGAGGATATTTCTTATCTCACAAACCGTGCTGCTGTTTACTTGGAAATGGGAAAGTATGAGGAATGCATAAAAGACTGTGATAAGGCTGTTGAAAGAGGAAGAGAACTAAGATCAGACTTCAAGATGATAGCAAGAGCTTTGACCCGGAAAGGAACTGCCTTGAATGGCATTAGGTTTTGTAAGCTGTATACTCTATCCATTTTATTTTTCTCATTTGGCGAGTTTTGGCATGCAGGAAATGAATACTTCAAGCAACAAAAGTATCCCGAGGCTGTGAGGCATTACACAGAGTCTTTGAGGAGAAACCCTAAAGATCCTAGGACTTACAGTAACAGAGCTGCATGCTACACCAAACTAGGGGCCATGCCGGAAGGTTTAAAGGATGCTGAGAAGTGCATTGAGCTGGATCCAACCTTTGTAAAGGGTTATACAAGGAAAGGTGCGGTACAGTTTTTCATGAAGGAATATGACAAGGCTTTGGAAACATATAAGGAGGGATTGAAACACGACCCCAACAATCAGGAGTTACTTGATGGCATTGGAAGATGTGTACAACAAATTAATAAGGCAAGCCGTGGGGATTTAAGTCCCGAAGAATTGAAGGAGAGACAGGCGAAGGCAATGCAAGATCCAGAGATACAGAACATCCTCCAAGACCCAGTAATGAGACAGGTATTGGTTGATTTCCAAGAAAATCCAAAGGCTGCACAGGAACATACGAAGAATCCAATGGTGATGAACAAAATCCAAAAACTCATCAGTGCTGGGATTGTCCAGATGAGGCGGTTCCGACCCCGGAGTTTTGGTCCGTTGTCCGTTTACAATGTAAAGTTTGTAAACCAACTTCAGGAATTTGGGCCTGTTATACGGACTCAGATTTGGGCTAGTTTACCGGCCGAAGACCTTTTGGGCTAG 1776 0.5039 MADEAKAKGNAAFSSGDYAAAVRHFSDAIALSPDNHVLYSNRSASYASLKKYSDALADAKKTVELKPDWSKGYSRLGAAHLGLSQYDDAIAAYKKGLEIDPNNEPLKSGLADAQAAASRARSAPANPFGDAFSGPEMWARLTADPTTRVYLQQPDFVKMMQDIQKDPNKLNLYLKDQRVMQAIGVLLNVKIRTPTDDADMPESSSPSPFPSPSPSPSERKRAAEAEPPRQPEPEPEPEPMDLSEEEKDKKLRKAEAQKQKEAGNAAYKKKDFDTAIHYYSKALELDDEDISYLTNRAAVYLEMGKYEECIKDCDKAVERGRELRSDFKMIARALTRKGTALNGIRFCKLYTLSILFFSFGEFWHAGNEYFKQQKYPEAVRHYTESLRRNPKDPRTYSNRAACYTKLGAMPEGLKDAEKCIELDPTFVKGYTRKGAVQFFMKEYDKALETYKEGLKHDPNNQELLDGIGRCVQQINKASRGDLSPEELKERQAKAMQDPEIQNILQDPVMRQVLVDFQENPKAAQEHTKNPMVMNKIQKLISAGIVQMRRFRPRSFGPLSVYNVKFVNQLQEFGPVIRTQIWASLPAEDLLG 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00994 591 ProSiteProfiles TPR repeat region circular profile. 70 103 - -
Adu05g00994 591 Gene3D - 124 191 - -
Adu05g00994 591 Gene3D Tetratricopeptide repeat domain 253 346 IPR011990 GO:0005515
Adu05g00994 591 MobiDBLite consensus disorder prediction 219 265 - -
Adu05g00994 591 PANTHER HSP70-HSP90 ORGANIZING PROTEIN 3 1 347 - -
Adu05g00994 591 PANTHER HSP70-HSP90 ORGANIZING PROTEIN 3 365 547 - -
Adu05g00994 591 SMART CBM 134 173 IPR006636 -
Adu05g00994 591 SMART CBM 497 536 IPR006636 -
Adu05g00994 591 PANTHER TPR REPEAT CONTAINING PROTEIN 1 347 IPR045248 GO:0006457|GO:0030544|GO:0051879
Adu05g00994 591 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Adu05g00994 591 SUPERFAMILY TPR-like 8 472 IPR011990 GO:0005515
Adu05g00994 591 Gene3D - 479 549 - -
Adu05g00994 591 Pfam Tetratricopeptide repeat 428 460 IPR001440 GO:0005515
Adu05g00994 591 Pfam Tetratricopeptide repeat 71 103 IPR001440 GO:0005515
Adu05g00994 591 SMART tpr_5 290 323 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 36 69 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 70 103 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 359 392 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 256 289 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 393 426 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 427 460 IPR019734 GO:0005515
Adu05g00994 591 SMART tpr_5 2 35 IPR019734 GO:0005515
Adu05g00994 591 Pfam STI1 domain 489 540 IPR041243 -
Adu05g00994 591 Pfam STI1 domain 135 188 IPR041243 -
Adu05g00994 591 ProSiteProfiles TPR repeat profile. 359 392 IPR019734 GO:0005515
Adu05g00994 591 ProSiteProfiles TPR repeat profile. 393 426 IPR019734 GO:0005515
Adu05g00994 591 PANTHER TPR REPEAT CONTAINING PROTEIN 365 547 IPR045248 GO:0006457|GO:0030544|GO:0051879
Adu05g00994 591 Pfam TPR repeat 366 407 - -
Adu05g00994 591 Pfam TPR repeat 263 304 - -
Adu05g00994 591 ProSiteProfiles TPR repeat profile. 256 289 IPR019734 GO:0005515
Adu05g00994 591 Coils Coil 240 260 - -
Adu05g00994 591 Pfam Tetratricopeptide repeat 7 67 - -
Adu05g00994 591 MobiDBLite consensus disorder prediction 195 265 - -
Adu05g00994 591 ProSiteProfiles TPR repeat profile. 70 103 IPR019734 GO:0005515
Adu05g00994 591 ProSiteProfiles TPR repeat profile. 427 460 IPR019734 GO:0005515
Adu05g00994 591 Gene3D Tetratricopeptide repeat domain 1 116 IPR011990 GO:0005515
Adu05g00994 591 Gene3D Tetratricopeptide repeat domain 360 478 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00994 Adu-Chr5 13014274 13017354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00994 366 470 U-box Gene Family AT3G07370 26.667 5.08e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00994 K09553 - gmx:100776102 828.165