Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00993 ATGGCTGCAAGAGTAGTAAGACATGGAGTTATTCTTGTACTGCCTCTCTTGCTGGCGAGCTTTGTAACTCAGGCAGGTGGAACAACCCCACAAGACTTCATAAAATCTTCATGCAGAGCAACGCGCTACCCTGCTGTCTGCGTGGAATGCCTCATGAGCTACGCAGGCGTGATTGGCCAAAGCAAGAGGCAACTAGCCCTGGCGGCCTTATCAGTGAGCATATCAAGGACACGGTCGTGTTCATCGTTCGTGAAGAAGATGGCGAAGGAGATGAAGATGAAGCCAAGGGAGTTAGGAGCGGTACAGGACTGCATAGAAAACATGGGGGACAGCATAGACAGGCTGAGCCAATCGGTGAGGGAGATGGGGCGCGTGGGTGAAGGAGTGGGAGAGGAATTTGAGTGGCACATGAGCAACGTGCAGACATGGGTGAGTGCTGCACTCACCGACGACAACACATGTCTTGATGGCTTTGGTGGCCGTGCCATGAATGGCAACGTCAAGGCAGCCATTAGAGGCAGGGTCCTCCATGTTGCTCAGCTCACAAGCTACTAG 555 0.5315 MAARVVRHGVILVLPLLLASFVTQAGGTTPQDFIKSSCRATRYPAVCVECLMSYAGVIGQSKRQLALAALSVSISRTRSCSSFVKKMAKEMKMKPRELGAVQDCIENMGDSIDRLSQSVREMGRVGEGVGEEFEWHMSNVQTWVSAALTDDNTCLDGFGGRAMNGNVKAAIRGRVLHVAQLTSY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00993 184 SMART PMEI_2 29 183 IPR006501 GO:0004857
Adu05g00993 184 Pfam Plant invertase/pectin methylesterase inhibitor 32 183 IPR006501 GO:0004857
Adu05g00993 184 CDD PMEI-like_3 36 183 - -
Adu05g00993 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 184 IPR035513 -
Adu05g00993 184 PANTHER PECTINESTERASE INHIBITOR 9 24 183 - -
Adu05g00993 184 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 183 IPR006501 GO:0004857
Adu05g00993 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 183 IPR035513 -
Adu05g00993 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 24 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00993 Adu-Chr5 13009225 13010304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00993 34 183 Carbohydrate Esterase AT3G14310 29.139 3.43e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00993 - - mtr:MTR_5g012000 227.254