Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00969 ATGAAAAGGCAAAAACACACGGCCATTCACTTCCACCACCATTCCACACAGCAAGAGATCTGTTGCACCACCACCAGCAACAGCAGCAGCAGCAATGGAAAAGACGGAACACCTGGAGGAGGAGGAGGAGGATCCGGTGAAACCGAAATGACAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAGAACAAACCCAAGCCACCGATCATCATCACCCGCGACAGTGCCAATGCCCTAAAGACGCACGTCATGGAGGTTGCAGACGGTTGCGACATCGTTGAGAGCGTCTCAAACTTCGCAAGGAGGCGCCAAAGAGGGGTTTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACACTCCGCCAACCAGCTTCCTCTGGAGCCGTCGTCTCCCTCCATGGAAGGTTCGAGATCTTGTCCCTGGCGGGATCCTTCCTCCCTCCTCCCGCTCCACCTGCGGCCTCCGGCTTGACCATATATCTAGCCGGAGGGCAAGGGCAGGTGGTCGGAGGGAGTGTGGTGGGGACACTGATTGCTTCCGGCCCGGTGGTCATCATGTCCGCTTCCTTCAGCAACGCTGCGTATGAGAGACTTCCTTTGGAGGAAGAGGACCCTTCCATGCCCTTGCAAGGGTCTGGCGGTGGCGGCGGCGGCTCAATCGGGTCCCCCGGTGGTGGTCAGCAGCATGCGCAGCAGCAGCAACAGCAGCAGATGTTAGGAGACGCAACTGCTCCACTCTTCCATGGTTTGAATCCGAATCTTCTGAATTCAGTTCAGATGCCAACGGAAGCTTTCTGGAATACTCCTGGTCGCTCTCCTTATTGA 828 0.57 MKRQKHTAIHFHHHSTQQEICCTTTSNSSSSNGKDGTPGGGGGGSGETEMTRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMSASFSNAAYERLPLEEEDPSMPLQGSGGGGGGSIGSPGGGQQHAQQQQQQQMLGDATAPLFHGLNPNLLNSVQMPTEAFWNTPGRSPY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00969 275 Gene3D - 79 207 - -
Adu05g00969 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 193 IPR005175 -
Adu05g00969 275 MobiDBLite consensus disorder prediction 14 36 - -
Adu05g00969 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 17 275 - -
Adu05g00969 275 MobiDBLite consensus disorder prediction 225 242 - -
Adu05g00969 275 MobiDBLite consensus disorder prediction 204 246 - -
Adu05g00969 275 ProSiteProfiles PPC domain profile profile. 76 213 IPR005175 -
Adu05g00969 275 MobiDBLite consensus disorder prediction 1 70 - -
Adu05g00969 275 PIRSF ESCAROLA 1 274 IPR014476 GO:0003680
Adu05g00969 275 CDD DUF296 80 147 IPR005175 -
Adu05g00969 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 275 IPR014476 GO:0003680
Adu05g00969 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00969 Adu-Chr5 12457146 12458445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00969 27 270 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 67.969 2.63e-83 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00969 - - gmx:100781436 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00969 05 12457146 12458445 Adu05g00969 05 12457146 12458445 ECH