Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00964 ATGAGAAAACACCGCCAAATTAACCTCTTTCATGCTCTGTTATGCTCCATTCTCTTCTTGGTTTCTTGTGTAACGGTATCACCAGCCACTGAGAGAGAGATTCTGCAACAATTCAAGGGCAACATCACAGAGGACCCTTTCAACAGCTTGAGTTCATGGGTTTCCAGTGGAAACCCCTGCCAAGATTACAGAGGTGTTTTCTGCAACGATGAAGGTTCTGTGGAAAGAATCATTCTTTGGAACACTAGCTTGGCTGGGGTGTTGTCTCCAGCATTGTCTGGTTTGAAGAGGTTGAGGACATTGACATTGTTTGGGAACCGGTTCAAGGGTAACATCCCAGATGATTATGCTGATCTTCACACATTGTGGAAGATCAATTTGAGCTCCAATGCGTTATCTGGTTCAATCCCAGAGTTCATTGGTGATTTGCCAAACATTCGGTTTCTAGATTTGTCCAAGAATGGCTTCACTGGGGAGATACCTTCAGCCTTGTTCAGGTACTGTTACAAAACCAGGTTTGTGTCTCTTTCTCATAACAACCTTGCTGGTCCAATTCCTGTGTCATTGGAGAATTGCTCCAACCTTGAAGGATTTGATCTTTCTTACAATAATCTGACCGGTGCTGTCCCTTCGCGGCTTTGTGATATTCCGAGCTTGTCATATGTGTCACTGAGAAGCAATGCCTTATCAGGGAGTGTGAAAGGTCTCATATCACCTTGCCGGAGCTTGAAACATTTGGATTTCGGTAGTAATATGTTCACAGATTTGGCTCCATTCAGCATCCTTGAAATGCAAAATCTTACTTATTTCAATATATCATATAATAGGTTTGGAGGAAATATTTCTGAGATCACAACCTGTAGTGAGAGATTAGAATTCTTTGATGGTTCCGGGAATGATTTGGATGGAGAATTTCCCTCCAGCATAATTAGATGCAAGAACCTAAAGCTCTTGGCCTTGGAGTTGAATAGGCTGAAAGGGAGTATCCCAGTTGATATTCAGGAATTGCAAAAATTTCTTCTTCAGTTGGACCTTTCTGGTAATAGCTTAGAGGGTGAGATTCCTCAGACCCTATACAACATGACATACTTGGAATCCCTCGACTTACATCAGAACCGGCTCAATGGAAGCATACCACCAAGCCTAGGAAACCTGTCAAAGTTGCAATACCTAGATCTGTCACATAATTCACTATCTAGTTTAATCCCATCTTCTCTTGGAAATTTAGGAAACATGACTCATTTTGATCTTTCATTCAACAATCTATCCGGTCTCATCCCTCAAATTGAAACCATACAGCGTTTTGGTCCATCTGCTTTTTCCAATAATCCTTTTCTCTGTGGTGCTCCTTTGGACACCTCTTGCTCGGCGAATGGAACTCCGTCACCTTCAGCACCTGGGAAGACTAAAGTTCTAAGCATCTCAGCAATTGTTGCGATTGTTGCTGCAGCTCTGATCCTTGCAGGGGTTTGTTTGGTAACCATCATGAATATTAGGGCTCGTCGTCGAAAAAAAGACAGTGATGAGATCATGGTTGTTGAGAGCACACCCCTTGGATCATCAACAGAATCAAATGTTATAATTGGAAAGCTGGTTCTGTTTAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACAAAAGCATTGCTTGACAAAGAGTCTATAATAGGTGGTGGATCAATTGGAACAGTGTACAGAACTGATTTTGAAGGCGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCCGAAACCAGGAAGAATTCGAGCACGAGATTGGACGATTAGGCAACCTCCAACACCCAAATTTGGTTTCTTTACAAGGTTACTATTGGTCCTCTTCAATGCAATTGATTCTATCAGAGTTTGTCCCTAATGGGAATCTCTATGATAATCTACATGGGATTGGATATCCCGGAACAAGCACTAGCAGTAGCAACAGGGAGTTATATTGGTTTAGAAGGTTCCAAATCGCACTTGGTACTGCAAGAGCACTCGCCTATCTTCACCATGACTGCAAACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATACTCTTAGATCACAAGTATGAGGCTAAGTTGTCTGACTATGGTTTAGGAAAGTTGCTCCCCATTTTGGACAATTACGGTCTGACCAAGTTCCACAATGTCGTTGGCTATGTCGCACCAGAATTGGCTCAAAGCCTAAGGCAGAGTGAGAAGTGTGATGTGTACAGTTTTGGGGTGATTCTTTTGGAGCTGGTTACAGGTAGGAAGCCAGTAGAAAGTCCAACAACAAGTGAGGTGGTCATCTTATGTGAATATGTAAGAAGTTTGTTAGAGGTTGGTTCAGCTTCAAATTGCTTTGACAGAAACTTATTGGGATTTGCTGAGAATGAGTTAATTCAGGTTATGAAGTTGGGACTAATTTGTACCTCGGAGGATCCATTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAGTCCATTAGAAATGGATTGGGAGCACACTAA 2526 0.4224 MRKHRQINLFHALLCSILFLVSCVTVSPATEREILQQFKGNITEDPFNSLSSWVSSGNPCQDYRGVFCNDEGSVERIILWNTSLAGVLSPALSGLKRLRTLTLFGNRFKGNIPDDYADLHTLWKINLSSNALSGSIPEFIGDLPNIRFLDLSKNGFTGEIPSALFRYCYKTRFVSLSHNNLAGPIPVSLENCSNLEGFDLSYNNLTGAVPSRLCDIPSLSYVSLRSNALSGSVKGLISPCRSLKHLDFGSNMFTDLAPFSILEMQNLTYFNISYNRFGGNISEITTCSERLEFFDGSGNDLDGEFPSSIIRCKNLKLLALELNRLKGSIPVDIQELQKFLLQLDLSGNSLEGEIPQTLYNMTYLESLDLHQNRLNGSIPPSLGNLSKLQYLDLSHNSLSSLIPSSLGNLGNMTHFDLSFNNLSGLIPQIETIQRFGPSAFSNNPFLCGAPLDTSCSANGTPSPSAPGKTKVLSISAIVAIVAAALILAGVCLVTIMNIRARRRKKDSDEIMVVESTPLGSSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESIIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEHEIGRLGNLQHPNLVSLQGYYWSSSMQLILSEFVPNGNLYDNLHGIGYPGTSTSSSNRELYWFRRFQIALGTARALAYLHHDCKPPILHLNIKSSNILLDHKYEAKLSDYGLGKLLPILDNYGLTKFHNVVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPTTSEVVILCEYVRSLLEVGSASNCFDRNLLGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLESIRNGLGAH 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00964 841 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Adu05g00964 841 Gene3D Ribonuclease Inhibitor 169 235 IPR032675 -
Adu05g00964 841 PANTHER - 9 338 - -
Adu05g00964 841 Pfam Leucine rich repeat 174 229 IPR001611 GO:0005515
Adu05g00964 841 Pfam Leucine rich repeat 363 422 IPR001611 GO:0005515
Adu05g00964 841 CDD STKc_IRAK 559 834 - -
Adu05g00964 841 SUPERFAMILY L domain-like 30 232 - -
Adu05g00964 841 Gene3D Ribonuclease Inhibitor 336 457 IPR032675 -
Adu05g00964 841 Gene3D Ribonuclease Inhibitor 236 335 IPR032675 -
Adu05g00964 841 Pfam Protein kinase domain 555 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00964 841 SUPERFAMILY Protein kinase-like (PK-like) 554 832 IPR011009 -
Adu05g00964 841 ProSiteProfiles Protein kinase domain profile. 553 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu05g00964 841 Gene3D Phosphorylase Kinase; domain 1 521 629 - -
Adu05g00964 841 ProSiteProfiles Leucine-rich repeat profile. 387 408 IPR001611 GO:0005515
Adu05g00964 841 SUPERFAMILY L domain-like 168 451 - -
Adu05g00964 841 PANTHER UNNAMED PRODUCT 338 837 - -
Adu05g00964 841 Gene3D Transferase(Phosphotransferase) domain 1 630 838 - -
Adu05g00964 841 PRINTS Leucine-rich repeat signature 340 353 - -
Adu05g00964 841 PRINTS Leucine-rich repeat signature 385 398 - -
Adu05g00964 841 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Adu05g00964 841 SMART LRR_typ_2 409 432 IPR003591 -
Adu05g00964 841 SMART LRR_typ_2 143 167 IPR003591 -
Adu05g00964 841 SMART LRR_typ_2 385 408 IPR003591 -
Adu05g00964 841 SMART LRR_typ_2 361 384 IPR003591 -
Adu05g00964 841 Gene3D Ribonuclease Inhibitor 28 168 IPR032675 -
Adu05g00964 841 PANTHER - 338 837 - -
Adu05g00964 841 PANTHER UNNAMED PRODUCT 9 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00964 Adu-Chr5 12360458 12364252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00964 27 838 Receptor kinase-like Gene Family AT1G62950 63.146 0.0 1041
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Adu05g00964 Pkinase 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00964 - - ming:122060169 1092.41