Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00949 ATGATGCAAGAACCAAGCTTGGGTATGATGGGTGGAGGAGGAGAGATGTCTTCAGCAACAGGGTCCGGCGGCGAGCAGCAACAGCGGCAGCTGAAGGCGGAGATAGCAACACACCCGCTGTACGAGCAGGTTCTGGCAGCACACGTGGCGTGCCTGAGAGTTGCAACGCCAATAGACCAGCTTCCACTTATAGACGCACAGCTATCACAATCACACCATGTTCTTCGCTCCTATGTCTCTCAACACACACTCTCTCTCTCTCCTCACGACCGTCAAGACCTTGATAATTTCCTCGCTCAGTACTTGATAGTGTTGTGTACTTTCAAAGAGCAGCTTCAGCAACATGTCAGAGTCCATGCCGTCGAGGCTGTCATGGCCTGCCGTGATATTGAAAATACCTTGCAAGCTCTCACCGGAGTGAGCCTGGGGGAAGGAAGTGGGGCAACAATGTCAGATGATGAAGATGAATTTCAGATGGATTTCTGTTTGGATCAGTCGAGTGGTGGTGGTGGTGATGACATGATGGGATTTGGTCCCTTACTCCCTACGGAATCAGAAAGGTCATTGATGGAAAGAGTCCGTCAAGAACTCAAGATTGAACTGAAGCAAGGATTCAAGTCAAGGATTGAAGATGTTAGGGAAGAAATCCTGAGGAAACGTAGAGCTGGCAAATTACCCGGTGACACCACTTCTGTCTTGAAGAACTGGTGGCAGCAGCATGCTAAGTGGCCTTATCCAACTGAAGATGACAAGGCAAAACTAGTGGAGGAGACAGGGTTGCAGCTGAAGCAAATCAACAACTGGTTCATCAACCAAAGGAAACGCAATTGGCACAGTAACTCTCAATCAGTTACCTCCCTCAAGTCCAAGCGCAAAAGAATGTAA 885 0.4893 MMQEPSLGMMGGGGEMSSATGSGGEQQQRQLKAEIATHPLYEQVLAAHVACLRVATPIDQLPLIDAQLSQSHHVLRSYVSQHTLSLSPHDRQDLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGSGATMSDDEDEFQMDFCLDQSSGGGGDDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKRM 294
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00949 294 ProSiteProfiles ELK domain profile. 196 216 IPR005539 GO:0003677
Adu05g00949 294 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 7 3 293 - -
Adu05g00949 294 MobiDBLite consensus disorder prediction 1 30 - -
Adu05g00949 294 Pfam KNOX2 domain 87 138 IPR005541 GO:0003677|GO:0005634
Adu05g00949 294 Pfam Homeobox KN domain 236 275 IPR008422 GO:0003677|GO:0006355
Adu05g00949 294 Gene3D - 215 289 - -
Adu05g00949 294 SMART HOX_1 218 283 IPR001356 GO:0003677
Adu05g00949 294 SMART KNOX1_2 29 73 IPR005540 GO:0003677|GO:0005634
Adu05g00949 294 CDD homeodomain 219 280 IPR001356 GO:0003677
Adu05g00949 294 Pfam KNOX1 domain 31 72 IPR005540 GO:0003677|GO:0005634
Adu05g00949 294 SUPERFAMILY Homeodomain-like 218 283 IPR009057 -
Adu05g00949 294 ProSiteProfiles 'Homeobox' domain profile. 216 279 IPR001356 GO:0003677
Adu05g00949 294 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 3 293 - -
Adu05g00949 294 SMART KNOX2_2 84 139 IPR005541 GO:0003677|GO:0005634
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu05g00949 Adu-Chr5 12180397 12184342 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00949 2 292 Homeobox Transcription Factor Family AT1G62990 78.644 4.30e-171 473
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Adu05g00949 KNOX2 1.2e-16 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00949 - - pvy:116142557 494.582
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00949 05 12180397 12184342 Adu05g00949 05 12180397 12184342 ECH