Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00941 ATGGCTTCATCATCATCATCTTCAAAGAGGCACCCGCTGTACCACGGAATCAGGTGTCGAGGAGGAAAATGGGTCTCCGAAATCCGGCAGCCACGTAAGGCTTCAAGAATATGGCTGGGGACGTTCCCCACGGCTGAGATGGCGGCTGCCGCCTACGACGTTGCCGCATTAGCACTCAAAGGCGACAGCGCCGTTCTCAACCTTCCTGAGTCAGCTGGAAAGTACCAAATTCCTGTAACTAACTCCCCTGATGACATCCGCAGGGCTGCCACTGCTGCTGCCGCTTTGATGAAGAAGAACCCTCAAGAACCCATCACCACTCCTCACATTATTACTGTTAATAATAATGATAATAACACTCTTGTTGATGGTATTAACAACAACCATATTATTAATTCGTCATCATGGTATGAGGATAATGATTTCATGGACGAGGAAGCTATATTCCGCATGCCAAGTTTGCTGGTGGATATGGCTGAGGGCATGCTTCTGTCGCCGCCGAGAATAATACTCAGCCCATCTCCGCCATCGTACAACTCCGGTGACGGAGGTGACACTTTGTGGAGTTACTTTTGA 576 0.4913 MASSSSSSKRHPLYHGIRCRGGKWVSEIRQPRKASRIWLGTFPTAEMAAAAYDVAALALKGDSAVLNLPESAGKYQIPVTNSPDDIRRAATAAAALMKKNPQEPITTPHIITVNNNDNNTLVDGINNNHIINSSSWYEDNDFMDEEAIFRMPSLLVDMAEGMLLSPPRIILSPSPPSYNSGDGGDTLWSYF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00941 191 PANTHER ETHYLENE RESPONSE FACTOR 1 191 - -
Adu05g00941 191 ProSiteProfiles AP2/ERF domain profile. 13 69 IPR001471 GO:0003700|GO:0006355
Adu05g00941 191 SMART rav1_2 13 75 IPR001471 GO:0003700|GO:0006355
Adu05g00941 191 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 191 - -
Adu05g00941 191 CDD AP2 12 71 IPR001471 GO:0003700|GO:0006355
Adu05g00941 191 Pfam AP2 domain 14 61 IPR001471 GO:0003700|GO:0006355
Adu05g00941 191 Gene3D AP2/ERF domain 13 70 IPR036955 GO:0003700|GO:0006355
Adu05g00941 191 SUPERFAMILY DNA-binding domain 13 70 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00941 Adu-Chr5 12060067 12060947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00941 10 190 AP2-EREBP Transcription Factor Family AT4G25490 46.448 5.59e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Adu05g00941 AP2 3.4e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00941 - - gmx:100811020 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu05g00941 05 12060067 12060947 Adu05g00941 05 12060067 12060947 ECH