Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu05g00938 ATGGTAAGCAGATACCCCATGCAATATAATGTCCAAATGCAAACCACAGAATGTGCCTTACAAGATATGAAGACGgtagctcggcacgtcgtcctcatcctcgccggcttctctgtccgtggcttggaccaactcgccttcgggtcaccgcttgccatcgtctctgctctcgccgtcatctcgccggttgctgccgtgtctctgttgaagGTATATATATCTTGGGTATTCGACAGTGAAGTAGAAGCTGCAAGAGCTTATGACAATGCTGCTATCAAATGCAATGGAAGGGAAGCAGTGACTAACTTTGAGCCAAGTACATATGAAGGGGAGATGAAATCTCCAGCCATCAATGAAGCAACTCCAGGACATGGTCTGAAAGAAAATAGGGGGCAACTCCAGTTCTCCTGGGTCCCTTACAGCATGCATGCTAGAAGAACAATGGTGAAAACCAATGTTAAAAAATAG 468 0.297 MVSRYPMQYNVQMQTTECALQDMKTVARHVVLILAGFSVRGLDQLAFGSPLAIVSALAVISPVAAVSLLKVYISWVFDSEVEAARAYDNAAIKCNGREAVTNFEPSTYEGEMKSPAINEATPGHGLKENRGQLQFSWVPYSMHARRTMVKTNVKK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu05g00938 155 SUPERFAMILY DNA-binding domain 76 105 IPR016177 GO:0003677
Adu05g00938 155 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 76 114 - -
Adu05g00938 155 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 76 114 - -
Adu05g00938 155 Gene3D AP2/ERF domain 70 105 IPR036955 GO:0003700|GO:0006355
Adu05g00938 155 SMART rav1_2 74 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu05g00938 Adu-Chr5 11991840 11994833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu05g00938 71 122 AP2-EREBP Transcription Factor Family AT4G36920 60.377 5.46e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu05g00938 K09284 - gmx:100777102 117.472